View conserved binding sites


Gene
CM00089G00010
Description
Staphylococcal nuclease domain-containing protein 1
Alias
MELO3C026154;MELO3C026154T1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-724
Upstream-725
Matrix_110ATABI4;AT3G57600Not availableUpstream-722
Matrix_119RRTF1Not availableUpstream-723
Matrix_138RRTF1Not availableUpstream-723
Matrix_146ORA47Not availableUpstream-724
Matrix_147ERF3;AT1G80580Not availableUpstream-724
Matrix_154AT1G22190;AT1G36060;AT1G64380;RAP2.4;AT2G20880;AT2G22200;AT4G13620;AT4G28140;AT4G39780;AT5G65130Not availableUpstream-722
Upstream-723
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-725
Matrix_171LBD3;LBD4Not availableUpstream-723
Matrix_224ERF1Not availableUpstream-723
Matrix_226GATA1Not availableUpstream-93
Matrix_230ARR11Not availableUpstream-93
Matrix_234RAP2.3Not availableUpstream-724
Matrix_243RAP2.12;RAP2.2Not availableUpstream-725
Matrix_252RAP2.6Not availableUpstream-724
Matrix_261ATERF-1Not availableUpstream-724
Upstream-725
Matrix_272DEAR4Not availableUpstream-724
Matrix_287ERF2Not availableUpstream-724
Matrix_288RAP2.3Not availableUpstream-723
Matrix_295ERF1Not availableUpstream-724
Matrix_321HRDNot availableUpstream-724
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-723
Upstream-724
Matrix_334AT3G23230Not availableUpstream-725
Matrix_343AT2G33710Not availableUpstream-724
Matrix_344ATERF15;AT4G18450Not availableUpstream-724
Matrix_350ARR14Not availableUpstream-93
Matrix_355ERF10;ERF11Not availableUpstream-723
Upstream-724
Matrix_360ORA59Not availableUpstream-724
Matrix_363RAP2.3Not availableUpstream-723
Matrix_374AT5G07580;AT5G61590Not availableUpstream-723
Upstream-724
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-724
Upstream-725
Matrix_378ATERF1Not availableUpstream-724
Matrix_395AT1G19210;ORA47;AT4G31060;AT5G21960Not availableUpstream-723
Upstream-724
Matrix_406ATERF-7Not availableUpstream-722
Upstream-723
Matrix_409DEAR3Not availableUpstream-723
Upstream-724
Matrix_426CRF1;CRF2Not availableUpstream-725
Matrix_45DRNNot availableUpstream-724
Matrix_454AT1G77200;ATERF38;AT4G16750;AT5G52020Not availableUpstream-723
Matrix_462ATERF-8Not availableUpstream-722
Upstream-723
Matrix_473RRTF1Not availableUpstream-724
Matrix_484ATERF13Not availableUpstream-724
Matrix_493AT1G22985;AT1G71130Not availableUpstream-724
Upstream-725
Matrix_496ATMYB15Not availableUpstream-720
Matrix_50ATERF14;AT5G43410Not availableUpstream-723
Upstream-724
Matrix_506DRNL;ATERF-4Not availableUpstream-725
Upstream-726
Matrix_517ERF12Not availableUpstream-724
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-723
Matrix_59AT4G00238;AT4G00250Not availableUpstream-723
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-725
Matrix_91CRF3Not availableUpstream-724
Upstream-725
Motif_22RYREPEATLEGUMINBOXRY repeat (CATGCAY) or legumin box found in seed-storage protein genes in legume such as soybeanUpstream-280
Upstream-281
Motif_222AGMOTIFNTMYB2AG-motif found at -114 of the promoter of NtMyb2 gene; NtMyb2 is a regulator of the tobacco retrotransposon Tto1 and the defence-related gene phenylalanine ammonia lyase (PAL), which are induced by various stress such as wounding or elicitor treatment; AGP1 (GATA-type zinc finger protein) binding siteUpstream-566
Motif_305SP1SV40SP-1 binding site (GC box) in enhancer regions of SV40 and human metallothionein IIA (hMT IIA)Upstream-724
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-725
Motif_353HEXAMERATH4hexamer motif of Arabidopsis thaliana histone H4 promoter;Identification of cis-elements regulating the expression of an Arabidopsis histone H4 geneUpstream-720
Motif_370TATABOX2TATA box; TATA box found in the 5'upstream region of pea legA gene; sporamin A of sweet potato; TATA box found in beta-phaseolin promoter; sequence and spacing of TATA box elements are critical for accurate initiationUpstream-764
Motif_511RYREPEATGMGY2RY repeat motif (CATGCAT); Present in the 5' region of the soybean glycinin gene (Gy2)Upstream-280
Upstream-281
Motif_640RYREPEATBNNAPARY repeat found in RY/G box (the complex containing the two RY repeats and the G-box) of napA gene in Brassica napus; Found between -78 and -50; Required for seed specific expression;dist B ABRE mediated transactivation by ABI3 adn ABI3-dependent response to ABA; a tetramer of the composite RY/G complex mediated only ABA-independent transactivation by ABI3; B2 domain of ABI3 is necessary for ABA-independent and ABA-dependent activation through the dist B ABREUpstream-280
Upstream-282