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Functional clusters
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BLAST
WorkbenchView conserved binding sites
- Gene
- CM00014G03110
- Description
- Probable pectinesterase
- Alias
- MELO3C010953;MELO3C010953T1
| Binding site | Name | Description | Location | Position |
|---|---|---|---|---|
| Matrix_119 | RRTF1 | Not available | Upstream | -150 |
| Upstream | -153 | |||
| Upstream | -156 | |||
| Upstream | -159 | |||
| Matrix_147 | ERF3;AT1G80580 | Not available | Upstream | -151 |
| Upstream | -154 | |||
| Upstream | -157 | |||
| Upstream | -160 | |||
| Matrix_243 | RAP2.12;RAP2.2 | Not available | Upstream | -152 |
| Upstream | -155 | |||
| Upstream | -158 | |||
| Upstream | -161 | |||
| Matrix_261 | ATERF-1 | Not available | Upstream | -148 |
| Upstream | -151 | |||
| Upstream | -154 | |||
| Upstream | -157 | |||
| Upstream | -160 | |||
| Matrix_287 | ERF2 | Not available | Upstream | -148 |
| Upstream | -151 | |||
| Upstream | -154 | |||
| Upstream | -157 | |||
| Upstream | -160 | |||
| Upstream | -1830 | |||
| Matrix_288 | RAP2.3 | Not available | Upstream | -150 |
| Upstream | -153 | |||
| Upstream | -156 | |||
| Upstream | -159 | |||
| Matrix_295 | ERF1 | Not available | Upstream | -151 |
| Upstream | -154 | |||
| Upstream | -157 | |||
| Upstream | -160 | |||
| Matrix_344 | ATERF15;AT4G18450 | Not available | Upstream | -151 |
| Upstream | -154 | |||
| Upstream | -157 | |||
| Upstream | -160 | |||
| Matrix_355 | ERF10;ERF11 | Not available | Upstream | -147 |
| Upstream | -150 | |||
| Upstream | -153 | |||
| Upstream | -156 | |||
| Upstream | -159 | |||
| Upstream | -1831 | |||
| Matrix_360 | ORA59 | Not available | Upstream | -151 |
| Upstream | -154 | |||
| Upstream | -157 | |||
| Upstream | -160 | |||
| Matrix_405 | DREB2C | Not available | Upstream | -152 |
| Upstream | -155 | |||
| Upstream | -158 | |||
| Matrix_406 | ATERF-7 | Not available | Upstream | -146 |
| Upstream | -149 | |||
| Upstream | -152 | |||
| Upstream | -155 | |||
| Upstream | -158 | |||
| Upstream | -1830 | |||
| Upstream | -1832 | |||
| Matrix_484 | ATERF13 | Not available | Upstream | -151 |
| Upstream | -154 | |||
| Upstream | -157 | |||
| Upstream | -160 | |||
| Upstream | -1832 | |||
| Matrix_5 | AT5G51190;ERF104 | Not available | Upstream | -1832 |
| Matrix_517 | ERF12 | Not available | Upstream | -151 |
| Upstream | -154 | |||
| Upstream | -157 | |||
| Upstream | -160 | |||
| Matrix_86 | CRF5;CRF6;CRF4 | Not available | Upstream | -152 |
| Upstream | -155 | |||
| Upstream | -158 | |||
| Upstream | -161 | |||
| Motif_270 | ELRECOREPCRP1 | ElRE (Elicitor Responsive Element) core of parsley PR1 genes; consensus sequence of elements W1 and W2 of parsley PR1-1 and PR1-2 promoters; Box W1 and W2 are the binding site of WRKY1 and WRKY2, respectively; ERE; WA box; One of the W boxes found in the Parsley WRKY1 gene promoter; Required for elicitor responsiveness; WC box WB box and WC box constitute a palindrome; WRKY1 protein binding site; W-box found in thioredoxin h5 gene in Arabidopsis | Upstream | -256 |
| Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | Upstream | -151 |
| Upstream | -154 | |||
| Upstream | -157 | |||
| Upstream | -160 |