View conserved binding sites


Gene
CM00007G04320
Description
SPS1-related proline-alanine-rich protein kinase
Alias
MELO3C007407;MELO3C007407T1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-215
Upstream-216
Upstream-217
Upstream-218
Upstream-219
Upstream-299
Matrix_119RRTF1Not availableUpstream-214
Matrix_138RRTF1Not availableUpstream-214
Matrix_146ORA47Not availableUpstream-215
Matrix_147ERF3;AT1G80580Not availableUpstream-215
Upstream-216
Upstream-218
Upstream-219
Upstream-299
Matrix_154AT1G22190;AT1G36060;AT1G64380;RAP2.4;AT2G20880;AT2G22200;AT4G13620;AT4G28140;AT4G39780;AT5G65130Not availableUpstream-213
Upstream-214
Upstream-297
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-216
Upstream-217
Upstream-300
Matrix_190ATERF1Not availableUpstream-215
Upstream-216
Upstream-217
Upstream-300
Matrix_224ERF1Not availableUpstream-214
Upstream-215
Upstream-217
Upstream-218
Upstream-298
Matrix_234RAP2.3Not availableUpstream-215
Upstream-216
Upstream-299
Matrix_243RAP2.12;RAP2.2Not availableUpstream-216
Upstream-217
Upstream-219
Upstream-220
Upstream-300
Matrix_252RAP2.6Not availableUpstream-215
Upstream-216
Upstream-299
Matrix_261ATERF-1Not availableUpstream-215
Upstream-216
Upstream-218
Upstream-219
Upstream-299
Matrix_272DEAR4Not availableUpstream-215
Upstream-216
Upstream-299
Matrix_277RAP2.6Not availableUpstream-217
Upstream-218
Matrix_287ERF2Not availableUpstream-215
Upstream-216
Upstream-218
Upstream-219
Upstream-299
Matrix_288RAP2.3Not availableUpstream-214
Matrix_295ERF1Not availableUpstream-215
Upstream-216
Upstream-218
Upstream-219
Upstream-299
Matrix_321HRDNot availableUpstream-215
Upstream-216
Upstream-218
Upstream-219
Upstream-299
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-214
Upstream-215
Upstream-217
Upstream-218
Upstream-298
Matrix_334AT3G23230Not availableUpstream-216
Upstream-217
Upstream-219
Upstream-220
Upstream-300
Matrix_343AT2G33710Not availableUpstream-215
Upstream-216
Upstream-218
Upstream-219
Upstream-299
Matrix_344ATERF15;AT4G18450Not availableUpstream-215
Upstream-216
Upstream-218
Upstream-219
Upstream-299
Matrix_355ERF10;ERF11Not availableUpstream-214
Upstream-215
Upstream-217
Upstream-218
Upstream-298
Matrix_356PRR5Not availableUpstream-1497
Matrix_360ORA59Not availableUpstream-215
Upstream-216
Upstream-218
Upstream-219
Upstream-299
Matrix_363RAP2.3Not availableUpstream-214
Matrix_374AT5G07580;AT5G61590Not availableUpstream-215
Upstream-216
Upstream-218
Upstream-219
Upstream-299
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-215
Upstream-216
Upstream-218
Upstream-219
Upstream-299
Matrix_378ATERF1Not availableUpstream-215
Upstream-216
Upstream-218
Upstream-219
Upstream-299
Matrix_387ORA47Not availableUpstream-213
Matrix_39AP1Not availableUpstream-222
Matrix_395AT1G19210;ORA47;AT4G31060;AT5G21960Not availableUpstream-214
Upstream-215
Upstream-298
Matrix_405DREB2CNot availableUpstream-216
Upstream-217
Upstream-219
Upstream-220
Matrix_406ATERF-7Not availableUpstream-213
Upstream-214
Upstream-216
Upstream-217
Upstream-297
Matrix_409DEAR3Not availableUpstream-214
Upstream-215
Upstream-298
Upstream-301
Matrix_426CRF1;CRF2Not availableUpstream-216
Upstream-217
Upstream-219
Upstream-220
Upstream-300
Matrix_433ATERF1Not availableUpstream-1916
Matrix_448ATERF6Not availableUpstream-217
Upstream-218
Matrix_45DRNNot availableUpstream-215
Upstream-216
Upstream-218
Upstream-219
Upstream-299
Matrix_454AT1G77200;ATERF38;AT4G16750;AT5G52020Not availableUpstream-217
Upstream-218
Matrix_462ATERF-8Not availableUpstream-213
Upstream-214
Upstream-216
Upstream-217
Upstream-297
Matrix_473RRTF1Not availableUpstream-215
Upstream-216
Upstream-299
Matrix_482AT2G25650;AT4G00270Not availableUpstream-220
Upstream-221
Matrix_484ATERF13Not availableUpstream-215
Upstream-216
Upstream-218
Upstream-219
Upstream-299
Matrix_493AT1G22985;AT1G71130Not availableUpstream-215
Upstream-216
Upstream-218
Upstream-219
Upstream-299
Matrix_5AT5G51190;ERF104Not availableUpstream-218
Upstream-219
Upstream-1917
Matrix_50ATERF14;AT5G43410Not availableUpstream-214
Upstream-215
Upstream-217
Upstream-218
Upstream-298
Matrix_506DRNL;ATERF-4Not availableUpstream-216
Upstream-217
Upstream-219
Upstream-220
Upstream-300
Matrix_514DYT1Regulation of the Arabidopsis anther transcriptome by DYT1 for pollen developmentUpstream-382
Matrix_517ERF12Not availableUpstream-215
Upstream-216
Upstream-299
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-214
Upstream-215
Upstream-217
Upstream-218
Upstream-298
Matrix_59AT4G00238;AT4G00250Not availableUpstream-217
Upstream-218
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-216
Upstream-217
Upstream-219
Upstream-220
Upstream-300
Matrix_91CRF3Not availableUpstream-215
Upstream-216
Upstream-218
Upstream-219
Upstream-299
Motif_104CAREOSREP1CAREs (CAACTC regulatory elements) found in the promoter region of a cystein proteinase (REP-1) gene in riceUpstream-108
Motif_131P1BSPHR1-binding sequence found in the upstream regions of phosphate starvation responsive genes from several plant species; phr1 (phosphate starvation response 1) gene codes for PHR1 protein related to PSR1 gene in C. reinhardtiiUpstream-471
Motif_145MYCATERD1MYC recognition sequence (from -466 to -461) necessary for expression of erd1 (early responsive to dehydration) in dehydrated Arabidopsis; NAC protein bound specifically to the CATGTG motif; NAC protein bound specifically to the CATGTG motifUpstream-362
Upstream-372
Motif_165AP3SV40AP-3 binding site consensus sequence in enhancer regions of SV40, MMTV, MLV, IL2Upstream-125
Upstream-358
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-385
Motif_194EBOXBNNAPAE-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1Upstream-362
Upstream-372
Motif_305SP1SV40SP-1 binding site (GC box) in enhancer regions of SV40 and human metallothionein IIA (hMT IIA)Upstream-215
Upstream-298
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-216
Upstream-219
Upstream-299
Motif_447AtMYC2 BS in RD22;PIF4Binding site for MYC (rd22BP1) in Arabidopsis dehydration-resposive gene, rd22; MYC binding site in rd22 gene of Arabidopsis thaliana; ABA-induction; Located at ca. -200 of rd22 gene; Also MYB at ca. -141 of rd22 gene; See also MYBATRD22; Role of Arabidopsis MYC and MYB homologs in drought- and abscisic acid-regulated gene expression. Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-362
Upstream-372
Motif_590MYB3 binding site motifExpression profile matrix of Arabidopsis transcription factor genes suggests their putative functions in response to environmental stressesUpstream-1653
Upstream-1696
Motif_627ACGTABREMOTIFA2OSEMExperimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in ArabidopsisUpstream-1499
Motif_72GADOWNATSequence present in 24 genes in the GA-down regulated d1 cluster (106 genes) found in Arabidopsis seed germination; This motif is similar to ABREUpstream-1499