View conserved binding sites


Gene
AT5G05270
Description
Chalcone-flavanone isomerase family protein
Alias
Q8VZW3;CHIL
Binding siteNameDescriptionLocationPosition
Matrix_113ABI5Not availableUpstream-274
Matrix_118PIF3_2Direct targeting of light signals to a promoter element-bound transcription factorUpstream-848
Matrix_122ABF1;AREB2Not availableUpstream-276
Matrix_129ABF1Not availableUpstream-275
Matrix_145GBF4;AT5G44080Not availableUpstream-274
Matrix_156POC1Not availableUpstream-274
Matrix_192FHY3/FAR1Not availableUpstream-274
Matrix_211MYB3Not availableUpstream-147
Matrix_264ATAREB1Not availableUpstream-278
Matrix_299PFG3Not availableUpstream-146
Matrix_301PIL5Not availableUpstream-274
Matrix_332SPT;ALCNot availableUpstream-274
Matrix_345POC1Not availableUpstream-848
Matrix_55PIF3Not availableUpstream-276
Matrix_7PIF4Not availableUpstream-273
Matrix_77PRR5Not availableUpstream-277
Motif_116INRNTPSADBInr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA boxUpstream-309
Upstream-34
Motif_171TCP binding consensusfound enriched in peaks in chip-seq data for SEP3Upstream-131
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-273
Motif_192BOXLCOREDCPALConsensus of the putative core sequences of box-L-like sequences in carrot; PAL1 promoter region; DCMYB1 bound to these sequences in vitroUpstream-144
Motif_244ABRE-like binding site motifNot availableUpstream-273
Motif_254MYB46;MYB83MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genesUpstream-316
Upstream-144
Motif_291ABFs binding site motifBinding site of trans-acting factor EMBP-1; wheat Em gene;Binding site of ABFs; ABFs (ABRE binding factors) were isolated from Arabidopsis by a yeast one-hybrid screening system; Expression ABFs is induced by ABA and various stress treatment; ABFs belongs to a distinct subfamily of bZIP proteins; Involved in ABA-mediated stress-signaling pathway;A plant leucine zipper protein that recognizes an abscisic acid response elementUpstream-273
Motif_292MYBPZMCore of consensus maize P (myb homolog) binding site; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genesUpstream-143
Motif_419MYB4 binding site motifNot availableUpstream-316
Upstream-144
Motif_448IRO2OSOsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiencyUpstream-273
Motif_51MYB46Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesisUpstream-316
Motif_585ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDHPRE (Pro- or hypoosmolarity-responsive element) found in the promoter region of proline dehydrogenase (ProDH) gene in Arabidopsis; Core of 9-bp sequence ACTCATCCT which is necessary for the efficient expression of ProDH in response to L-Pro and hypoosmolarity; ATB2-binding site; Similar to GCN4 motif (ATGA(C/G)TCAT); ATB2 subgroup of bZIP transcription factors function as transcriptional activator for hypoosmolarity-inducible ProDH; A Novel Subgroup of bZIP Proteins Functions as Transctiptional Activators in Hypsosmolarity-Responsive Expression of the ProDH gene in ArabidopsisUpstream-306
Motif_638ABRE binding site motifNot availableUpstream-273