View conserved binding sites


Gene
AT2G40030
Description
nuclear RNA polymerase D1B
Alias
Q5D869;DEFECTIVE IN MERISTEM SILENCING 5
Binding siteNameDescriptionLocationPosition
Matrix_372ANAC81DNA binding specificity of ATAF2, a NAC domain transcription factor targeted for degradation by Tobacco mosaic virusUpstream-767
Matrix_396AP3Not availableUpstream-14
Motif_119ABI3Gene regulation during late embryogenesis: the RY motif of maturation-specific gene promoters is a direct target of the FUS3 gene productUpstream-636
Motif_358UP2ATMSDUp2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in ArabidopsisUpstream-12
Motif_404AACACOREOSGLUB1Core of AACA motifs found in rice glutelin genes, involved in controlling the endosperm-specific expression; AACA is also closely associated with the GCN4 motif in all rice glutelin genes and together have been shown to confer endosperm-specific enhancement to the truncated -90 CaMV 35S promoterUpstream-70
Motif_585ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDHPRE (Pro- or hypoosmolarity-responsive element) found in the promoter region of proline dehydrogenase (ProDH) gene in Arabidopsis; Core of 9-bp sequence ACTCATCCT which is necessary for the efficient expression of ProDH in response to L-Pro and hypoosmolarity; ATB2-binding site; Similar to GCN4 motif (ATGA(C/G)TCAT); ATB2 subgroup of bZIP transcription factors function as transcriptional activator for hypoosmolarity-inducible ProDH; A Novel Subgroup of bZIP Proteins Functions as Transctiptional Activators in Hypsosmolarity-Responsive Expression of the ProDH gene in ArabidopsisUpstream-1449