Matrix_101 | ERF5 | Not available | Upstream | -171 |
Matrix_119 | RRTF1 | Not available | Upstream | -172 |
Matrix_138 | RRTF1 | Not available | Upstream | -172 |
Matrix_146 | ORA47 | Not available | Upstream | -171 |
Matrix_147 | ERF3;AT1G80580 | Not available | Upstream | -171 |
Matrix_155 | RAP2.6;ERF110;ABR1 | Not available | Upstream | -170 |
Matrix_224 | ERF1 | Not available | Upstream | -172 |
Matrix_234 | RAP2.3 | Not available | Upstream | -171 |
Matrix_243 | RAP2.12;RAP2.2 | Not available | Upstream | -170 |
Matrix_252 | RAP2.6 | Not available | Upstream | -171 |
Matrix_255 | cdf3 | Not available | Upstream | -55 |
Matrix_260 | CAMTA3 | Not available | Upstream | -1264 |
Matrix_261 | ATERF-1 | Not available | Upstream | -171 |
Matrix_272 | DEAR4 | Not available | Upstream | -171 |
Matrix_287 | ERF2 | Not available | Upstream | -171 |
Matrix_288 | RAP2.3 | Not available | Upstream | -172 |
Matrix_295 | ERF1 | Not available | Upstream | -171 |
Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -172 |
Matrix_334 | AT3G23230 | Not available | Upstream | -170 |
Matrix_343 | AT2G33710 | Not available | Upstream | -171 |
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -172 |
Matrix_360 | ORA59 | Not available | Upstream | -171 |
Matrix_363 | RAP2.3 | Not available | Upstream | -172 |
Matrix_377 | AT1G75490;DREB2C;AT2G40350;AT5G18450 | Not available | Upstream | -171 |
Matrix_378 | ATERF1 | Not available | Upstream | -171 |
Matrix_406 | ATERF-7 | Not available | Upstream | -173 |
Matrix_409 | DEAR3 | Not available | Upstream | -172 |
Matrix_426 | CRF1;CRF2 | Not available | Upstream | -170 |
Matrix_45 | DRN | Not available | Upstream | -171 |
Matrix_462 | ATERF-8 | Not available | Upstream | -173 |
Matrix_473 | RRTF1 | Not available | Upstream | -171 |
Matrix_48 | PI | Not available | Upstream | -333 |
Matrix_484 | ATERF13 | Not available | Upstream | -171 |
Matrix_493 | AT1G22985;AT1G71130 | Not available | Upstream | -171 |
Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -172 |
Matrix_506 | DRNL;ATERF-4 | Not available | Upstream | -170 |
Matrix_517 | ERF12 | Not available | Upstream | -171 |
Matrix_518 | AT2G21230 | Not available | Upstream | -191 |
Matrix_57 | WIN1;SHN3;SHN2 | Not available | Upstream | -172 |
Matrix_86 | CRF5;CRF6;CRF4 | Not available | Upstream | -170 |
Matrix_91 | CRF3 | Not available | Upstream | -171 |
Motif_249 | DPBF1&2 binding site motif | A novel class of bZIP transcription factors, DPBF-1 and 2 (Dc3 promoter-binding factor-1 and 2) binding core sequence; Found in the carrot Dc3 gene promoter; Dc3 expression is normally embryo-specific, and also can be induced by ABA; The Arabidopsis abscisic acid response gene ABI5 encodes a bZIP transcription factor; abi5 mutant have a pleiotropic defects in ABA response; ABI5 regulates a subset of late embryogenesis-abundant genes; GIA1 (growth-insensitivity to ABA) is identical to ABI5; Isolation of a novel class of bZIP transcription factors that interact with ABA-responsive and embryo-specification elements in the Dc3 promoter using a modified yeast one-hybrid system | Upstream | -401 |
Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | Upstream | -170 |
Motif_318 | CGCGBOXAT | CGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRs | Upstream | -1261 |
Motif_353 | HEXAMERATH4 | hexamer motif of Arabidopsis thaliana histone H4 promoter;Identification of cis-elements regulating the expression of an Arabidopsis histone H4 gene | Upstream | -480 |
Motif_391 | REALPHALGLHCB21 | REalpha found in Lemna gibba Lhcb21 gene promoter; Located at -134 to -129; Binding site of proteins of whole-cell extracts; The DNA binding activity is high in etiolated plants but much lower in green plants; Required for phytochrome regulation | Upstream | -16 |
Motif_489 | SORLREP3AT | one of Sequences Over-Represented in Light-Repressed Promoters (SORLREPs) in Arabidopsis; Computationally identified phyA-repressed motifs; See also all SORLREPs and also all SORLIPs;Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data | Upstream | -407 |
Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | Upstream | -329 |
| | | Upstream | -45 |