View conserved binding sites


Gene
AT1G28470
Description
NAC domain containing protein 10
Alias
ANAC010
Binding siteNameDescriptionLocationPosition
Matrix_105SPL14Not availableUpstream-1146
Matrix_181Dof5.7Not availableUpstream-122
Matrix_206CUC1;ANAC100Not availableUpstream-215
Matrix_23ANAC46Not availableUpstream-216
Matrix_268EMB2749;VND5;SMB;VND1;ANAC076;NAC101;ANAC105Not availableUpstream-217
Matrix_322NST3;ANAC015;BRN2Not availableUpstream-216
Matrix_342SPL14Identification of a Consensus DNA-Binding Site for the Arabidopsis thaliana SBP Domain Transcription Factor, AtSPL14, and Binding Kinetics by Surface Plasmon ResonanceUpstream-1146
Matrix_41anac058Not availableUpstream-215
Matrix_414AGL15Not availableUpstream-131
Matrix_469NAC041;NAC083Not availableUpstream-215
Matrix_48PINot availableUpstream-90
Matrix_74LFYNot availableIntron892
Motif_125BOXIINTPATPBBox II found in the tobacco plastid atpB gene promoter; Conserved in several NCII (nonconsensus type II) promoters of plastid genes; Important for the activity of this NCII promoterUpstream-116
Motif_155NODCON1GMOne of two putative nodulin consensus sequences; See also NODCON2GM; One of the consensus sequence motifs of organ-specific elements (OSE) characteristic of the promoters activated in infected cells of root nodulesUpstream-99
Motif_248L1-boxArabidopsis DELLA and two HD-ZIP transcription factors regulate GA signaling in the epidermis through the L1 box cis-elementUpstream-274
Motif_33ACGTCBOXC-box according to the nomenclature of ACGT elements; One of ACGT elements; Factors groups 1, 2 and 3 have affinity for C-box;RITA-1 binding siteUpstream-220
Motif_346SND1;VND6;VND7;NST1;NST2Global analysis of direct targets of secondary wall NAC master switches in ArabidopsisUpstream-226
Motif_425ANAC013;ANAC016;ANAC017;ANAC053;ANAC078A membrane-bound NAC transcription factor is a regulator of mitochondrial retrograde regulation involved in oxidative stress responses in Arabidopsis thalianaUpstream-223
Motif_453HEXMOTIFTAH3H4hexamer motif found in promoter of wheat histone genes H3 and H4; CaMV35S; NOS; Binding with HBP-1A and HBP-1B; Binding site of wheat nuclear protein HBP-1 (histone DNA binding protein-1); HBP-1 has a leucine zipper motif; hexamer motif in type 1 element may play important roles in regulation of replication- dependent but not of replication-independent expression of the wheat histone H3 gene;Rice OBF1-homodimer-binding siteUpstream-221
Motif_576TGACGTVMAMYTGACGT motif found in the Vigna mungo alpha-Amylase (Amy) gene promoter; Located between -128 and -123; Required for high level expression of alpha-Amylase in the cotyledons of the germinated seedsUpstream-221
Motif_580L1BOXATPDF1L1 box found in promoter of Arabidopsis thaliana PROTODERMAL FACTOR1 (PDF1) gene; Located between -134 and -127; Involved in L1 layer-specific expression; L1-specific homeodomain protein ATML can bind to the L1 box; Y=C/T; A cotton fiber gene, RD22-like 1 (RDL1), contains a homeodomain binding L1 box and a MYB binding motif ; HDZip IV; Identification of a cis-regulatory element for L1 layer-specific gene expression, which is targeted by an L1-specific homeodomain proteinUpstream-274