PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Motif_507
Name: ABASEED1
Description: ABA regulation; seed expression; Gene: carrot Dc3; Transacting factor: bZIP; Contains ACGT motif

Sequence: TGTTACGTGCC
Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Motif_112	GBOX10NT	One of 11 G-box sequences in tobacco; Required for high-level constitutive expression in seed, leaf, root, axillary bud, almost all parts of flower buds and pollen	72.73%
Motif_652	AUXRETGA2GMGH3	TGA-box #2 in putative auxin-resonsive element (AUXRE) E1 of soybean GH3 promoter; Strong binding site for proteins in plant nuclear extracts; Hex-like element; E1 element=-249 to -203; E2 element=-241 to -224	72.73%
Motif_211	ABREMOTIFIOSRAB16B	Motif I found in the promoter of rice rab16B gene; Motif I and motif III are both required for ABA responsiveness; However, each can substitute for the other	72.73%
Motif_499	AtMYC2	A basic helix-loop-helix transcription factor in Arabidopsis, MYC2, acts as a repressor of blue light-mediated photomorphogenic growth	72.73%
Motif_573	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	72.73%
Matrix_339	bHLH104	Not Available	69.96%
Motif_82	ACGTSEED3	ACGT motif related to seed expression; Gene: synthetic; wild-type motif (Iwt) containing G-box-related sequence; transacting factor: bZIP; A tobacco bZip transcription activator (TAF-1) binding site	63.64%
Motif_300	ACGTROOT1; HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression. ACGT motif related to root expression; Gene: synthetic; perfect palindromic sequence (PA) containing G-box-related sequence; transacting factor: TAF-1; Binding of SGBF-1 (a Soybean G-box binding bZIP transcription factor) to ABRE is enhanced by SCOF-1 (a zinc finger protein ); Transcription of SCOF-1 is induced by low temperature and ABA	63.64%
Motif_617	ABRE3HVA1	ABA responsive element, ABRE3, found in barley HVA1 gene encoding a class 3 late embryogenesis-abundant protein; stress response	63.64%
Motif_639	WRKY18	Identification of genes encoding receptor-like protein kinases as possible targets of pathogen- and salicylic acid-induced WRKY DNA-binding proteins in Arabidopsis	63.64%
Motif_62	AtMYB44	Two novel MYB homologues with changed expression in late embryogenesis-defective Arabidopsis mutants	63.64%
Motif_685	PALINDROMICCBOXGM	Palindromic C-box in soybean;bZIP factors, STGA1 and STFs (STF1 and STF2) found in soybean apical hypocotyl, bind to this sequence	63.64%
Motif_334	MYB1; MYB2	An Arabidopsis myb homolog is induced by dehydration stress and its gene product binds to the conserved MYB recognition sequence. Evidence for a role for AtMYB2 in the induction of the Arabidopsis alcohol dehydrogenase gene (ADH1) by low oxygen	63.64%
Motif_314	HY5AT	G box; Binding site of Arabidopsis bZIP protein HY5; HY5 is constitutively nuclear localized and is involved in light regulation of transcriptional activity of the promoters containing the G-box;HY5 abundance peaks in early seedling development, consistent with its role in promoting photomorphogenesis; HY5 stability and activity is regulated by phosphorylation in its COP1 binding domain; HY5 regulates stimulus-induced development of root and hypocotyl	63.64%
Motif_53	ABREA2HVA1	A2 of ABRC3; ABRC3 (ABA response complex 3) of HVA1 consists of CE3 and A2; ABA responsive element; stress response; Found in barley HVA1 gene encoding a class 3 late embryogenesis-abundant (Lea) protein; ABRC1 OF HVA22 consists of CE1 and A3	63.64%
Motif_599	LREBOXIIPCCHS1; HY5	BoxII; Light responsive element (LRE) found in the parsley CHS-1 (chalcone synthase-1) gene promoter; Required for light responsiveness; nuclear protein binding site; Highly conserved in various light inducible gene promoters; Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	63.64%
Motif_67	LS5ATPR1	LS5; A negative regulatory element found in the Arabidopsis PR-1 gene promoter; Binding site of TGA2; NPR1 increased the binding of TGA2 to the element; NPR1 is essential in activating systemic, inducible plant defense response; TGA6 expressed in roots in young seedlings; TGA2.1 is a direct transcriptional activator; TGA2.2 stabilizes TGA2.1 binding; The Arabidopsis NPR1/NIM1 protein enhances the DNA binding activity of a subgroup of the TGA family of bZIP transcription factors	63.64%
Motif_418	ABRE2HVA22	ABRE2 of barley HVA22 gene; G-box; component of ABA response complex in HVA22 gene; see ABRE3 of HVA22 gene; see CE1 (coupling element 1 = TGCCACCGG)	63.64%
Motif_542	ABI5; AtMYC2; HY5	A basic helix-loop-helix transcription factor in Arabidopsis, MYC2, acts as a repressor of blue light-mediated photomorphogenic growth. Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression. The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis	63.64%
Motif_250	ACGTOSGLUB1	ACGT motif found in GluB-1 gene in rice; Required for endosperm-specific expression; Conserved in the 5'-flanking region of glutelin genes; Combination of GCN4, AACA and ACGT motifs was found sufficient to confer a detectable level of endosperm expression	63.64%
Motif_483	ABREMOTIFAOSOSEM	motif A ABRE-like sequence found in rice Osem gene promoter; Essential for activation by VP1; Important for regulation by ABA;TRAB1, bZIP transcription factor, interacts with VP1 and mediates abscisic acid-induced transcritption;ABRE motif A found in the promoter of the rice Osem gene; ACGT-containing ABRE; Required for ABA-responsiveness and VP1 activation; Binding site of TRAB1; Motif A and CE3 are functionally equivalent; TRAB1, bZIP transcription factor, interacts with VP1 and mediates abscisic acid-induced transcritption	63.64%
Motif_566	AREB1; AREB2	Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses	63.64%
Motif_154	ABREBNNAPA	ABRE of napA storage-protein gene of Brassica napus; ABA responsive element; dist B ABRE mediated transactivation by ABI3 adn ABI3-dependent response to ABA; a tetramer of the composite RY/G complex mediated only ABA-independent transactivation by ABI3; B2 domain of ABI3 is necessary for ABA-independent and ABA-dependent activation through the dist B ABRE; B3 domain of ABI3 interacts with the RY/G complex	63.64%
Motif_440	TGA1 binding site motif	Hex motif; Binding site of Arabidopsis bZIP protein TGA1 and G box binding factor GBF1; TGA1 and members of the GBF family differ in their DNA binding properties; G-Box-like element;TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG	63.64%
Motif_583	AtbZIP1	The arabidopsis bZIP1 transcription factor is involved in sugar signaling, protein networking, and DNA binding	63.64%
Motif_281	ABRE3OSRAB16	ABA-responsive element of rice rab16 and alpha-amylase genes	63.64%
Motif_275	AtbZIP1	The arabidopsis bZIP1 transcription factor is involved in sugar signaling, protein networking, and DNA binding	63.64%
Motif_424	GATA-1	Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics	63.64%
Motif_498	SGBFGMGMAUX28	bZIP proteins SGBF-1 and SGBF-2 binding site in soybean GmAux28 gene promoter	63.64%
Motif_487	ACIIIPVPAL2	ACIII element found at -246 to -238 of bean PAL2 promoter; ACIII element is required for vascular-specific gene expression; See also ACIPVPAL2 and ACIIPVPAL2; Three AC-elements, which are possible Myb protein binding sites, together with a G-box, interact to direct the complex patterns of tissu-specific expression of pAL2 gene	63.64%
Motif_120	ABRETAEM	ABRE (ABA responsive element) found in wheat Em gene; transacting factor: EMBP-1; EMBP-1 binds to CACGTGGC	63.64%
Matrix_469	NAC041; NAC083	Not Available	63.55%
Matrix_480	BES1	Not Available	62.60%
Matrix_90	BEE1; BEE3; AT3G07340; AT5G48560; AT5G50915	Not Available	62.31%
Motif_232	ABADESI1	Responsive to ABA and desiccation; Motif I of rice rab16A-D (initially called rab-21); Expressed in seeds late during embryogenesis; Induced by ABA and osmotic stress in vegetative tissues; Contains ACGT motif; transacting factor: TAF-1	60.31%
Matrix_225	MYB52	Not Available	59.81%
Matrix_323	BIM3	Not Available	59.76%
Motif_638	ABRE binding site motif	Not Available	59.09%
Motif_372	E2FAT	E2F-binding site found in many potential E2F target genes; most potential E2F targets identified in silico show a cell cycle-regulated expression	59.09%
Matrix_460	NAM; anac025; ATNAC2	Not Available	58.80%
Matrix_158	AT1G03040; LRL1; UNE12; LRL2; LRL3	Not Available	58.79%
Matrix_449	BIM2	Not Available	58.69%
Matrix_200	PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815	Not Available	58.28%
Matrix_211	MYB3	Not Available	57.79%
Matrix_209	RAP2.6	Not Available	57.64%
Matrix_337	MYB46	Not Available	57.42%
Motif_497	ARE1	ARE (antioxidant response element); antioxidant response element of rat glutathione S-transferase Ya subunit, and rat NAD(P)H:quinone reductase genes	57.24%
Matrix_424	MYB59	Not Available	56.86%
Matrix_221	SPL7	Not Available	56.78%
Matrix_273	ANAC55	Not Available	56.78%
Motif_648	ARE2	ARE (antioxidant response element); antioxidant response element of mouse metallothionein-I (MT-I) gene; Consensus sequence of mouse MT-I and MT-II genes, and MT genes isolated from rat, hamster, human, sheep, chicken, Drosophila melanogaster, C. elegans; See ARE1	56.03%
Matrix_315	MYB111	Not Available	55.90%
Motif_200	GBOXLERBCS	G box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; Binding with GBF	55.76%
Motif_627	ACGTABREMOTIFA2OSEM	Experimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in Arabidopsis	55.76%
Matrix_320	MYC4	Not Available	55.67%
Matrix_330	MYC2; TT8	Not Available	55.66%
Matrix_120	BEE2	Not Available	55.57%
Matrix_307	RGL2; RGL3	Not Available	55.44%
Matrix_41	anac058	Not Available	55.33%
Motif_244	ABRE-like binding site motif	Not Available	55.06%
Matrix_465	MYC4	Not Available	54.98%
Matrix_31	SPL1	Not Available	54.91%
Matrix_122	ABF1; AREB2	Not Available	54.89%
Matrix_134	ABF1	Not Available	54.69%
Matrix_156	POC1	Not Available	54.68%
Motif_576	TGACGTVMAMY	TGACGT motif found in the Vigna mungo alpha-Amylase (Amy) gene promoter; Located between -128 and -123; Required for high level expression of alpha-Amylase in the cotyledons of the germinated seeds	54.55%
Motif_291	ABFs binding site motif	Binding site of trans-acting factor EMBP-1; wheat Em gene;Binding site of ABFs; ABFs (ABRE binding factors) were isolated from Arabidopsis by a yeast one-hybrid screening system; Expression ABFs is induced by ABA and various stress treatment; ABFs belongs to a distinct subfamily of bZIP proteins; Involved in ABA-mediated stress-signaling pathway;A plant leucine zipper protein that recognizes an abscisic acid response element	54.55%
Motif_445	PDF2; ATML1	Regulation of shoot epidermal cell differentiation by a pair of homeodomain proteins in Arabidopsis. Identification of a cis-regulatory element for L1 layer-specific gene expression, which is targeted by an L1-specific homeodomain protein	54.55%
Motif_251	SUP	The Arabidopsis SUPERMAN protein is able to specifically bind DNA through its single Cys2-His2 zinc finger motif	54.55%
Motif_162	ABRE3HVA22	ABRE3 of barley HVA22 gene; G-box; component of ABA response complex in HVA22 gene; ABA response complex 1(ABRC1)=A3(previously designated ABRE3)+CE1	54.55%
Motif_174	SREATMSD	sugar-repressive element (SRE) found in 272 of the 1592 down-regulated genes after main stem decapitation in Arabidopsis	54.55%
Motif_216	PYRIMIDINEBOXHVEPB1	Pyrimidine box found in the barley EPB-1 (cysteine proteinase) gene promoter; Located between -120 to -113; Required for GA induction	54.55%
Motif_589	ARECOREZMGAPC4	Putative binding site for a Myb found in the promoter of maize glycolytic glyceraldehyde-3-phospate dehydrogenase 4 (GapC4) gene; Essential for anaerobic induction	54.55%
Motif_644	ABREDISTBBNNAPA	dist B (distal portion of B-box) found in napA gene of Brassica napus; Shows similarity to ABRE; Found between -148 and -124; Required for seed specific expression and ABA responsiveness;dist B ABRE mediated transactivation by ABI3 adn ABI3-dependent response to ABA; a tetramer of the composite RY/G complex mediated only ABA-independent transactivation by ABI3; B2 domain of ABI3 is necessary for ABA-independent and ABA-dependent activation through the dist B ABRE	54.55%
Motif_663	E2F binding site motif; E2F/DP BS in AtCDC6	Not Available	54.55%
Motif_17	AUXRETGA1GMGH3	TGA-box #1 in putative auxin-resonsive element (AUXRE) of soybean GH3 promoter; Strong binding site for proteins in plant nuclear extracts	54.55%
Motif_429	MYB98	MYB98 positively regulates a battery of synergid-expressed genes encoding filiform apparatus localized proteins	54.55%
Motif_13	E2F-varient binding site motif	A genome-wide identification of E2F-regulated genes in Arabidopsis	54.55%
Motif_571	GBOXSORBCS1	G-box found in the spinach RBCS-1 gene promoter; Located between -219 and -212; G-box trimer confers relatively high level expression in roots	54.55%
Motif_508	CEREGLUBOX1PSLEGA	cereal glutenin box in pea legumin gene (legA); sequence homologous to the cereal glutenin gene control element (-300 element)	54.55%
Motif_338	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	54.55%
Motif_323	MYB1LEPR	Tomato Pti4(ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1(GTTAGTT), G box (CACGTG))	54.55%
Motif_550	MRE motif in CHS	MREAtCHS (MRE = Myb Recognition Element) found in the LRU (light-responsive unit) in Arabidopsis chalcone synthase (CHS) gene promoter; Required for UV-B and UV-A/blue light responsiveness;Identification of UV/blue light-response elements in the Arabidopsis thaliana chalcone synthase promoter using a homologous protoplast transient expression system	54.55%
Motif_124	ABREMOTIFIIIOSRAB16B	Motif III found in the promoter of rice rab16B gene; Motif I and motif III are both required for ABA responsiveness; However, each can substitute for the other	54.55%
Motif_558	BOXIIPCCHS	Core of Box II/G box found in the parsley chs genes; Essential for light regulation	54.55%
Motif_560	GLUTECOREOS	Core site required for binding of the trans-acting factor in the promoter region of rice glutelin (type 2 glutelin gene family)	54.55%
Motif_680	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	54.55%
Motif_234	ABADESI2	Synthetic element (hex-3) related to response to ABA and to desiccation; seed expression; Gene: synthetic; hex-3, mutant of hex-1 sequence from wheat histone H3 promoter; transacting factor: bZIP	54.55%
Motif_158	ZDNAFORMINGATCAB1	Z-DNA-forming sequence found in the Arabidopsis chlorophyll a/b binding protein gene (cab1) promoter; Involved in light-dependent developmental expression of the gene; Z-box; Activation of Z-box containing promoters is regulated by downstream regulatory components, COP1 and HY5; phyB and CRY1 photoreceptors act redundantly to induce Z-box containing promoters in white light; Identification of upstream regulatory elements involved in the developmental expression of the Arabidopsis thaliana cab1 gene	54.55%
Motif_681	TDBA12NTCHN50	TDBA12 binding site found in tobacco basic class I chitinase gene (CHN50); Elicitor response element; TDBA12 belongs to WRKY proteins that appear to be unique to plants; TDBA12 is activated by TMV infection in resistant tobacco plant and by plant defense signal molecule SA	54.55%
Motif_252	GBOXPC	G box; Binding site of parsley cytosolic G-box binding factors (cytosolic GBFs); Cytosolic G-Box binding activity is modulated by light; DNA binding activity of cytosolic GBFs is regulated by cytosolic phosphorylation/dephospholylation activities; Cytosolic GBFs are translocated to the nucleus in a light-regulated manner	54.55%
Motif_534	GBOXRELOSAMY3	G box-related element found in Amy3D (amylase) promoter of rice; Similar to ABRE	54.55%
Motif_593	E2Fb; E2Fc; E2Fd; E2Ff; E2Fe; E2Fa	The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants. Arabidopsis E2F1 binds a sequence present in the promoter of S-phase-regulated gene AtCDC6 and is a member of a multigene family with differential activities	54.55%
Motif_365	ARF1 binding site motif	ARF (auxin response factor) binding site found in the promoters of primary/early auxin response genes of Arabidopsis thaliana; AuxRE;Binding site of Arabidopsis ARF1 (Auxin response factor1); Sequence found in NDE element in Soybean SAUR (Small Auxin-Up RNA) 15A gene promoter;Found in D1 or D4 element in Soybean GH3 promoter; This element was enriched in the 5'-flanking region of genes up-regulated by both IAA and BL;Dimerization and DNA binding of auxin response factors	54.55%
Motif_33	ACGTCBOX	C-box according to the nomenclature of ACGT elements; One of ACGT elements; Factors groups 1, 2 and 3 have affinity for C-box;RITA-1 binding site	54.55%
Motif_199	GCN4OSGLUB1	GCN4 motif found in GluB-1 gene in rice; Required for endosperm-specific expression; AACA and ACGT motifs was found sufficient to confer a detectable level of endosperm expression; This motif is the recognition site for a basic leucine zipper transcription factor that belongs to the group of maize Opaque-2 (O2)-like proteins; Although all the RISBZ proteins are able to interact with the GCN4 motif, only RISBZ1 is capable of activating the gene expression	54.55%
Motif_197	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	54.55%
Motif_388	CPRFPCCHS; AtbZIP1	BoxII; Binding site of CPRF-1, -2, -3 and -4(Common Plant Regulatory Factor) in the parsley light responsive chalcone synthase (CHS) gene promoter; CPRF proteins are bZIP class transcription factors; CPRF proteins participates in the light-mediated activation of the CHS gene in parsley; ACE; The proline-rich domains of CPRF1 and 4 activate transcription; CPRF1-containing bZIP heterodimer interacts with ACE in vivo; ACE; Binding site of parsley bZIP factors CPRF1 and 4; Found in the parsley light responsive chalcone synthase (CHS) gene promoter; The proline-rich domains of CPRF1 and 4 activate transcription; CPRF1-containing bZIP heterodimer interacts with ACE in vivo; The arabidopsis bZIP1 transcription factor is involved in sugar signaling, protein networking, and DNA binding	54.55%
Motif_61	PALBOXLPC	Box L; Consensus; One of three putative cis-acting elements (boxes P, A, and L) of phenylalanine ammonia-lyase (PAL; EC 4.3.1.5) genes in parsley; None of these elements (boxes P, A, and L) alone, or the promoter region containing all of them together, conferred elicitor or light responsiveness. These elements appear to be necessary but not sufficient for elicitor- or light-mediated PAL gene activation	54.55%
Motif_374	HY5	Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression	54.55%
Motif_64	ABAREG2	Motif related to ABA regulation; Gene: sunflower helianthinin; transacting factor: bZIP	54.55%
Motif_239	MYB2	Evidence for a role for AtMYB2 in the induction of the Arabidopsis alcohol dehydrogenase gene (ADH1) by low oxygen	54.55%
Motif_26	GRF7	Arabidopsis GROWTH-REGULATING FACTOR7 Functions as a Transcriptional Repressor of Abscisic Acid- and Osmotic Stress-Responsive Genes, Including DREB2A	54.55%
Motif_633	PE2FNTRNR1A	pE2F (proximal E2F elemen) at -143bp of tobacco RNR1a promoter; E2F factors involved in gene induction at the G1/S transition of the cell cycle; Important for regulating specific RNR1a (ribonucleotide reductase large subunit) gene expression in response to UV-C irradiation	54.55%
Motif_72	GADOWNAT	Sequence present in 24 genes in the GA-down regulated d1 cluster (106 genes) found in Arabidopsis seed germination; This motif is similar to ABRE	54.55%
Motif_400	ABREAZMRAB28	ABA-responsive element (ABRE A) found at -148 to -139 in maize rab28; Maize rab28 is ABA-inducible in embryos and vegetative tissues	54.55%
Motif_80	AP1SV40	AP-1 binding site in enhancer regions of SV40 and human metallothionein IIA (hMT IIA)	54.55%
Motif_604	EMHVCHORD	Endosperm motif (EM) found in the promoter of barley c-hordein gene; Involved in the nitrogen response of c-hordein promoter	54.55%
Motif_362	TGA2 octamer	palindromic octamer found enriched in chip-chip regions for TGA2	54.55%
Motif_189	CMSRE1IBSPOA	CMSRE-1 (Carbohydrate Metabolite Signal Responsive Element 1) found in the promoter of sweet potato sporamin A gene	54.55%
Motif_406	ABREBZMRAB28	ABA-responsive element (ABRE B) found at -105 to -96 in maize rab28; Maize rab28 is ABA-inducible in embryos and vegetative tissues	54.55%
Motif_528	ABI5	The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis	54.55%
Motif_662	MYB26PS	Myb26 binding site; Myb26 recognizes the c-Myb and P-box-like binding sites representing cis-elements in the promoter regions of several phenylpropanoid biosynthetic genes; Identical to P-box in maize, and to Myb305 binding site in snapdragon	54.55%
Motif_306	E2Fb	Arabidopsis E2F1 binds a sequence present in the promoter of S-phase-regulated gene AtCDC6 and is a member of a multigene family with differential activities	54.55%
Motif_56	O2F3BE2S1	opaque-2 recognition site F3 in Bertholletia excelsa (Brazil nut tree) 2S storage protein gene (be2S1); O2 protein binds to F1, F2 and F3 sequences of be2S1 promoter; F3 is hybrid of A/G box	54.55%
Matrix_365	AT1G10120; AT1G25330; CIB5; AT1G68920; AT3G23690; CIB1	Not Available	54.49%
Matrix_137	SPL1; SPL12	Not Available	54.00%
Matrix_332	SPT; ALC	Not Available	53.94%
Matrix_247	PIF3	Not Available	53.94%
Matrix_150	UNE10; PIF7	Not Available	53.85%
Matrix_437	MYC2	Not Available	53.76%
Matrix_516	ANAC038; ANAC079	Not Available	53.73%
Matrix_104	PI	Not Available	53.38%
Matrix_389	ILR3	Not Available	53.38%
Matrix_129	ABF1	Not Available	53.16%
Matrix_64	PIF5	Not Available	52.61%
Matrix_60	AT1G01260; AT5G57150	Not Available	52.57%
Matrix_14	ZCW32; AT5G62610	Not Available	52.33%
Matrix_80	BIM1	Not Available	52.03%
Matrix_188	SPL4	Not Available	52.02%
Matrix_85	SPL5	Not Available	51.98%
Matrix_228	TGA2	Not Available	51.93%
Matrix_282	bZIP60	Not Available	51.91%
Matrix_7	PIF4	Not Available	51.64%
Matrix_450	SPL7	Not Available	51.37%
Matrix_455	MYB111	Not Available	51.27%
Motif_92	ABREATRD22	ABRE (ABA responsive element) in Arabidopsis dehydration-responsive gene rd22	51.22%
Matrix_199	AT1G69170; SPL9; SPL15; SPL13A; SPL13B	Not Available	51.10%
Matrix_20	ANAC030; NST1; NAC066	Not Available	50.81%
Matrix_11	TRFL5	Not Available	50.70%
Matrix_55	PIF3	Not Available	50.69%
Matrix_476	bHLH115; bHLH34	Not Available	50.65%
Matrix_178	HSFB2A	Not Available	50.62%
Matrix_233	MYC3	Not Available	50.61%
Matrix_113	ABI5	Not Available	50.49%
Matrix_206	CUC1; ANAC100	Not Available	50.46%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	50.38%
Matrix_257	NAC050; ANAC051; anac057; NAC2	Not Available	50.30%
Matrix_299	PFG3	Not Available	50.27%
Matrix_1	TOE2	Not Available	50.03%
Motif_348	WBBOXPCWRKY1	WB box; WRKY proteins bind specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box; Found in amylase gene in sweet potato, alpha-Amy2 genes in wheat, barley, and wild oat, PR1 gene in parsley, and a transcription factor gene in Arabidopsis	50.00%
Motif_443	KN1; BP	The knotted1-like homeobox gene BREVIPEDICELLUS regulates cell differentiation by modulating metabolic pathways. Selective interaction of plant homeodomain proteins mediates high DNA-binding affinity	50.00%
Motif_5	SORLREP1	Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data	50.00%
Motif_603	SITEIIATCYTC	Site II element found in the promoter regions of cytochrome genes (Cytc-1, Cytc-2) in Arabidopsis; Located between -147 and -156 from the translational starts sites;Overrepresented in the promoters of nuclear genes encoding components of the oxidative phosphorylation (OxPhos) machinery from both Arabidopsis and rice	50.00%
Matrix_494	OBP4	Not Available	50.00%