Matrix_433 | ATERF1 | Not Available | | 74.30% |
Matrix_253 | ETT | Not Available | | 69.49% |
Matrix_448 | ATERF6 | Not Available | | 69.20% |
Motif_522 | E2Fa | The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants | | 69.03% |
Motif_165 | AP3SV40 | AP-3 binding site consensus sequence in enhancer regions of SV40, MMTV, MLV, IL2 | | 68.75% |
Matrix_285 | DDF1 | Not Available | | 66.08% |
Matrix_504 | WRKY40 | Not Available | | 65.58% |
Matrix_299 | PFG3 | Not Available | | 65.53% |
Matrix_151 | ASIL1 | Not Available | | 65.50% |
Matrix_197 | NAP | Not Available | | 65.35% |
Matrix_326 | AT5G07310; Rap2.6L; AT5G61890 | Not Available | | 63.94% |
Matrix_415 | WRKY27 | Not Available | | 63.91% |
Motif_621 | bZIP23; bZIP19 | Arabidopsis thaliana transcription factors bZIP19 and bZIP23 regulate the adaptation to zinc deficiency | | 63.91% |
Matrix_277 | RAP2.6 | Not Available | | 63.88% |
Matrix_316 | WRKY15; WRKY39; WRKY7; WRKY74 | Not Available | | 63.84% |
Motif_203 | bZIP23; bZIP19 | Arabidopsis thaliana transcription factors bZIP19 and bZIP23 regulate the adaptation to zinc deficiency | | 63.70% |
Matrix_31 | SPL1 | Not Available | | 63.61% |
Matrix_355 | ERF10; ERF11 | Not Available | | 63.60% |
Matrix_202 | WRKY71; WRKY28; WRKY8 | Not Available | | 63.38% |
Matrix_500 | WRKY43 | Not Available | | 63.38% |
Matrix_20 | ANAC030; NST1; NAC066 | Not Available | | 63.20% |
Matrix_211 | MYB3 | Not Available | | 62.98% |
Matrix_315 | MYB111 | Not Available | | 62.57% |
Matrix_373 | E2FE | Not Available | | 62.42% |
Matrix_363 | RAP2.3 | Not Available | | 62.26% |
Matrix_335 | HSFB2A | Not Available | | 62.01% |
Matrix_59 | AT4G00238; AT4G00250 | Not Available | | 61.65% |
Matrix_314 | WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52 | Not Available | | 61.62% |
Matrix_50 | ATERF14; AT5G43410 | Not Available | | 61.54% |
Matrix_325 | WRKY4; WRKY3; WRKY58; ATWRKY34; WRKY20; ATWRKY2 | Not Available | | 61.45% |
Matrix_322 | NST3; ANAC015; BRN2 | Not Available | | 61.39% |
Matrix_171 | LBD3; LBD4 | Not Available | | 61.18% |
Matrix_321 | HRD | Not Available | | 60.72% |
Matrix_249 | WRKY11 | Not Available | | 60.70% |
Matrix_282 | bZIP60 | Not Available | | 60.59% |
Matrix_493 | AT1G22985; AT1G71130 | Not Available | | 60.56% |
Matrix_340 | HSFC1 | Not Available | | 60.19% |
Matrix_424 | MYB59 | Not Available | | 60.12% |
Matrix_337 | MYB46 | Not Available | | 60.08% |
Matrix_273 | ANAC55 | Not Available | | 59.91% |
Matrix_368 | ATWRKY56; WRKY45; WRKY75; WRKY24 | Not Available | | 59.28% |
Matrix_454 | AT1G77200; ATERF38; AT4G16750; AT5G52020 | Not Available | | 59.28% |
Matrix_119 | RRTF1 | Not Available | | 59.13% |
Matrix_245 | WRKY62; WRKY38 | Not Available | | 59.09% |
Matrix_289 | WRKY25 | Not Available | | 59.08% |
Matrix_228 | TGA2 | Not Available | | 59.05% |
Matrix_235 | WRKY67; WRKY64; WRKY63; WRKY66 | Not Available | | 58.96% |
Matrix_91 | CRF3 | Not Available | | 58.87% |
Matrix_422 | TOE1 | Not Available | | 58.64% |
Matrix_307 | RGL2; RGL3 | Not Available | | 58.53% |
Matrix_455 | MYB111 | Not Available | | 58.37% |
Matrix_275 | ZAP1 | Characterization of a zinc-dependent transcriptional activator from Arabidopsis | | 58.23% |
Matrix_221 | SPL7 | Not Available | | 58.10% |
Matrix_23 | ANAC46 | Not Available | | 58.07% |
Matrix_61 | ATCBF3 | Not Available | | 57.95% |
Matrix_165 | KNAT1 | Not Available | | 57.80% |
Matrix_516 | ANAC038; ANAC079 | Not Available | | 57.68% |
Matrix_199 | AT1G69170; SPL9; SPL15; SPL13A; SPL13B | Not Available | | 57.67% |
Matrix_377 | AT1G75490; DREB2C; AT2G40350; AT5G18450 | Not Available | | 57.56% |
Matrix_450 | SPL7 | Not Available | | 57.53% |
Matrix_224 | ERF1 | Not Available | | 57.31% |
Matrix_420 | ANAC58 | Not Available | | 57.22% |
Matrix_446 | LBD16 | Not Available | | 57.22% |
Matrix_57 | WIN1; SHN3; SHN2 | Not Available | | 57.16% |
Matrix_261 | ATERF-1 | Not Available | | 57.14% |
Matrix_1 | TOE2 | Not Available | | 57.10% |
Matrix_288 | RAP2.3 | Not Available | | 56.93% |
Motif_485 | NRRBNEXTA | NRR (negative regulatory region) in promoter region of Brassica napus extA extensin gene; Removal of this region leads to expression in all tissues within the stem internode, petiole and root | | 56.72% |
Motif_286 | SEBFCONSSTPR10A | Binding site of the potato silencing element binding factor (SEBF) gene found in promoter of pathogenesis-related gene (PR-10a); Located between -45 and -39; Similar to the auxin response element | | 56.38% |
Matrix_169 | E2F1 | Not Available | | 56.30% |
Matrix_138 | RRTF1 | Not Available | | 56.29% |
Matrix_3 | WRKY48 | Not Available | | 56.02% |
Matrix_409 | DEAR3 | Not Available | | 56.00% |
Matrix_141 | AT3G25990 | Not Available | | 55.98% |
Matrix_263 | WRKY33; WRKY19; WRKY32 | Not Available | | 55.94% |
Matrix_313 | ATMYB65; MYB33 | Not Available | | 55.82% |
Motif_219 | E2Fa | The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants | | 55.78% |
Matrix_259 | AT1G50680; AT1G51120 | Not Available | | 55.73% |
Motif_680 | HY5 | Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression | | 55.71% |
Matrix_85 | SPL5 | Not Available | | 55.67% |
Matrix_513 | SOL1; TSO1; TCX2 | Not Available | | 55.49% |
Matrix_268 | EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105 | Not Available | | 55.44% |
Matrix_116 | ANAC55 | Not Available | | 55.19% |
Matrix_260 | CAMTA3 | Not Available | | 55.16% |
Motif_374 | HY5 | Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression | | 54.99% |
Matrix_5 | AT5G51190; ERF104 | Not Available | | 54.92% |
Matrix_44 | CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2 | Not Available | | 54.88% |
Motif_312 | OCTAMERMOTIFTAH3H4 | Octamer motif found in promoter of wheat histone genes H3 and H4, and corn histone genes H3 and H4; Arabidopsis histone H4; histone-specific octamer; About half of the Oct motifs are present together with another element, HexA, TCA or CCAAT-box, forming OCES (Oct-containing composite elements); Nucleotide sequences of two corn histone H3 genes. Genomic organization of the corn histone H3 and H4 genes | | 54.82% |
Motif_64 | ABAREG2 | Motif related to ABA regulation; Gene: sunflower helianthinin; transacting factor: bZIP | | 54.79% |
Matrix_489 | RAV1 | Not Available | | 54.67% |
Matrix_209 | RAP2.6 | Not Available | | 54.64% |
Motif_295 | HY5 | Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression | | 54.56% |
Matrix_308 | INO | Not Available | | 54.50% |
Motif_648 | ARE2 | ARE (antioxidant response element); antioxidant response element of mouse metallothionein-I (MT-I) gene; Consensus sequence of mouse MT-I and MT-II genes, and MT genes isolated from rat, hamster, human, sheep, chicken, Drosophila melanogaster, C. elegans; See ARE1 | | 54.35% |
Matrix_287 | ERF2 | Not Available | | 54.17% |
Motif_255 | B2GMAUX28 | B2; DNase I protected sequence found in the soybean auxin responsive gene, Aux28, promoter; Located between -310 and -301; Contains a TGACGACA sequence which is similar to TGACGT/C sequence found in Ocs, CaMV35S and histone H3 promoter; Contains as-1 motif | | 54.13% |
Motif_444 | OCTAMOTIF2 | Octamer motif found in histone-gene-specific consensus sequences; 200 base upstream from the initiation codon ATG; Exist in all of seven plant histone genes | | 54.08% |
Matrix_70 | GATA26 | Not Available | | 54.07% |
Matrix_188 | SPL4 | Not Available | | 54.02% |
Motif_128 | HY5 | Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression | | 54.02% |
Motif_509 | AtTINY2 | Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana | | 53.96% |
Matrix_382 | AT3G04850 | Not Available | | 53.95% |
Matrix_370 | WRKY50; WRKY51 | Not Available | | 53.80% |
Motif_319 | AtTINY2 | Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana | | 53.74% |
Matrix_389 | ILR3 | Not Available | | 53.66% |
Matrix_395 | AT1G19210; ORA47; AT4G31060; AT5G21960 | Not Available | | 53.65% |
Matrix_398 | TBP2; ATTRB2 | Not Available | | 53.56% |
Matrix_374 | AT5G07580; AT5G61590 | Not Available | | 53.53% |
Matrix_293 | WRKY38 | Not Available | | 53.25% |
Matrix_220 | WRKY18 | Not Available | | 53.12% |
Matrix_101 | ERF5 | Not Available | | 53.07% |
Matrix_75 | WRKY29 | Not Available | | 53.03% |
Matrix_257 | NAC050; ANAC051; anac057; NAC2 | Not Available | | 53.02% |
Motif_560 | GLUTECOREOS | Core site required for binding of the trans-acting factor in the promoter region of rice glutelin (type 2 glutelin gene family) | | 52.95% |
Motif_17 | AUXRETGA1GMGH3 | TGA-box #1 in putative auxin-resonsive element (AUXRE) of soybean GH3 promoter; Strong binding site for proteins in plant nuclear extracts | | 52.47% |
Motif_122 | TGTCACACMCUCUMISIN | TGTCACA motif found in the region (from -254 to -215) of cucumisin (a subtilisin-like serine protease) in the fruit of melon; A novel enhancer element necessary for fruit-specific expression of the cucumisin gene | | 52.43% |
Matrix_148 | WRKY60 | Not Available | | 52.38% |
Matrix_84 | AtGRF6 | Not Available | | 52.37% |
Matrix_401 | MYB55 | Not Available | | 52.35% |
Matrix_102 | WRKY21 | Not Available | | 52.35% |
Matrix_155 | RAP2.6; ERF110; ABR1 | Not Available | | 52.32% |
Matrix_344 | ATERF15; AT4G18450 | Not Available | | 52.29% |
Matrix_329 | WRKY12 | Not Available | | 52.25% |
Matrix_384 | ATWRKY17 | Not Available | | 52.17% |
Matrix_207 | WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49 | Not Available | | 52.17% |
Motif_573 | HY5 | Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression | | 52.17% |
Matrix_81 | YAB1 | Not Available | | 52.14% |
Matrix_265 | NGA3 | Not Available | | 52.02% |
Matrix_193 | RAV1 | Not Available | | 52.02% |
Matrix_323 | BIM3 | Not Available | | 51.99% |
Matrix_376 | WRKY45 | Not Available | | 51.97% |
Matrix_120 | BEE2 | Not Available | | 51.96% |
Matrix_343 | AT2G33710 | Not Available | | 51.90% |
Matrix_12 | EIN3; EIL2 | Not Available | | 51.76% |
Matrix_243 | RAP2.12; RAP2.2 | Not Available | | 51.69% |
Motif_26 | GRF7 | Arabidopsis GROWTH-REGULATING FACTOR7 Functions as a Transcriptional Repressor of Abscisic Acid- and Osmotic Stress-Responsive Genes, Including DREB2A | | 51.54% |
Motif_332 | SV40COREENHAN | SV40 core enhancer; Similar sequences found in rbcS genes | | 51.52% |
Matrix_183 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | | 51.51% |
Matrix_362 | DEAR3 | Not Available | | 51.50% |
Matrix_158 | AT1G03040; LRL1; UNE12; LRL2; LRL3 | Not Available | | 51.32% |
Motif_60 | AtERF-4; AtERF-3 | Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression | | 51.30% |
Matrix_163 | AT2G20110 | Not Available | | 51.28% |
Matrix_215 | ARF1 | ARF1, a transcription factor that binds to auxin response elements | | 51.24% |
Matrix_470 | WRKY18 | Not Available | | 51.21% |
Matrix_371 | MYB7; AtMYB6; AtMYB32; ATMYB4 | Not Available | | 51.16% |
Matrix_463 | HAT3.1 | Not Available | | 51.12% |
Motif_275 | AtbZIP1 | The arabidopsis bZIP1 transcription factor is involved in sugar signaling, protein networking, and DNA binding | | 51.10% |
Matrix_200 | PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815 | Not Available | | 50.97% |
Motif_348 | WBBOXPCWRKY1 | WB box; WRKY proteins bind specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box; Found in amylase gene in sweet potato, alpha-Amy2 genes in wheat, barley, and wild oat, PR1 gene in parsley, and a transcription factor gene in Arabidopsis | | 50.88% |
Motif_226 | E2F1OSPCNA | re2f-1 found in the promoter of rice PCNA gene; Located between -142 and -135; te2f-1 found in the promote of Tobacco PCBA gene; Located between -122 and -115; Binding site of OsE2F1 and OsE2F2; Involved in transcriptional activation in actively dividing cells and tissue | | 50.87% |
Matrix_390 | GT-1 | Not Available | | 50.86% |
Matrix_449 | BIM2 | Not Available | | 50.83% |
Matrix_462 | ATERF-8 | Not Available | | 50.75% |
Matrix_143 | GATA14; GATA6; GATA5 | Not Available | | 50.71% |
Matrix_53 | MYC3 | Not Available | | 50.68% |
Motif_641 | LRENPCABE | LRE; A positive light regulatory element in tobacco CAB (cab-E) gene; Located at -241 | | 50.66% |
Motif_338 | HY5 | Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression | | 50.64% |
Matrix_45 | DRN | Not Available | | 50.53% |
Motif_51 | MYB46 | Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesis | | 50.45% |
Matrix_406 | ATERF-7 | Not Available | | 50.45% |
Motif_393 | AUXREPSIAA4 | AuxRE (Auxine responsive element ) of pea PS-IAA4/5 gene; Indoleacetic acid-inducible genes; domain A; TGA1a is preferentially expressed in root tip meristems; TGA1a may contribute to the expression of GST isoenzymes, especially in root tip meristems | | 50.44% |
Motif_74 | HY5 | Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression | | 50.40% |
Matrix_137 | SPL1; SPL12 | Not Available | | 50.35% |
Matrix_333 | GATA3 | Not Available | | 50.34% |
Motif_525 | CRTDREHVCBF2 | Preferred sequence for AP2 transcriptional activator HvCBF2 of barley; Core CRT/DRE motif; HvCBF2 bound to a (G/a)(T/c)CGAC core motif; DNA binding is regulated by temperature | | 50.30% |
Matrix_388 | SNZ; SMZ; TOE2 | Not Available | | 50.26% |
Matrix_469 | NAC041; NAC083 | Not Available | | 50.25% |
Matrix_17 | WRKY22 | Not Available | | 50.24% |
Matrix_37 | GATA27 | Not Available | | 50.18% |
Motif_633 | PE2FNTRNR1A | pE2F (proximal E2F elemen) at -143bp of tobacco RNR1a promoter; E2F factors involved in gene induction at the G1/S transition of the cell cycle; Important for regulating specific RNR1a (ribonucleotide reductase large subunit) gene expression in response to UV-C irradiation | | 50.17% |
Matrix_167 | ZAT6 | Not Available | | 50.14% |
Motif_487 | ACIIIPVPAL2 | ACIII element found at -246 to -238 of bean PAL2 promoter; ACIII element is required for vascular-specific gene expression; See also ACIPVPAL2 and ACIIPVPAL2; Three AC-elements, which are possible Myb protein binding sites, together with a G-box, interact to direct the complex patterns of tissu-specific expression of pAL2 gene | | 50.13% |
Matrix_152 | EIL1; AT5G65100 | Not Available | | 50.10% |
Matrix_274 | EDF3 | Not Available | | 50.08% |
Matrix_367 | REM1 | Not Available | | 50.08% |
Matrix_330 | MYC2; TT8 | Not Available | | 50.06% |
Motif_619 | SITEIIBOSPCNA | Site IIb of rice PCNA (proliferating cell nuclear antigen) gene; Found at -178 to -169; Binding site for two nuclear proteins, PCF1 and PCF2; Suggested to be involved in meristematic tissue-specific expression; Resemble the conserved motif (T/GGTCCCAT) found in promoter regions of auxin-regulated genes | | 50.02% |