PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_377
Name: AT1G75490; DREB2C; AT2G40350; AT5G18450
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_321	HRD	Not Available	86.40%
Matrix_91	CRF3	Not Available	85.57%
Matrix_493	AT1G22985; AT1G71130	Not Available	84.59%
Matrix_261	ATERF-1	Not Available	83.15%
Matrix_374	AT5G07580; AT5G61590	Not Available	78.41%
Matrix_454	AT1G77200; ATERF38; AT4G16750; AT5G52020	Not Available	77.97%
Matrix_409	DEAR3	Not Available	76.68%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	74.83%
Matrix_355	ERF10; ERF11	Not Available	74.77%
Matrix_50	ATERF14; AT5G43410	Not Available	73.59%
Matrix_57	WIN1; SHN3; SHN2	Not Available	73.38%
Matrix_334	AT3G23230	Not Available	73.27%
Matrix_287	ERF2	Not Available	72.20%
Matrix_151	ASIL1	Not Available	71.74%
Matrix_343	AT2G33710	Not Available	71.73%
Matrix_243	RAP2.12; RAP2.2	Not Available	71.51%
Matrix_395	AT1G19210; ORA47; AT4G31060; AT5G21960	Not Available	71.40%
Matrix_101	ERF5	Not Available	71.20%
Matrix_475	AT5G64220	Not Available	70.25%
Matrix_61	ATCBF3	Not Available	69.98%
Matrix_80	BIM1	Not Available	69.96%
Matrix_92	AT1G33760	Not Available	69.83%
Matrix_188	SPL4	Not Available	68.49%
Matrix_59	AT4G00238; AT4G00250	Not Available	68.40%
Matrix_169	E2F1	Not Available	68.35%
Matrix_265	NGA3	Not Available	68.14%
Matrix_193	RAV1	Not Available	68.14%
Matrix_484	ATERF13	Not Available	67.74%
Matrix_45	DRN	Not Available	67.59%
Matrix_244	DREB2C	Not Available	67.57%
Matrix_362	DEAR3	Not Available	67.47%
Matrix_415	WRKY27	Not Available	67.46%
Matrix_506	DRNL; ATERF-4	Not Available	67.45%
Matrix_73	DEAR3; RAP2.9; RAP2.10	Not Available	67.32%
Matrix_277	RAP2.6	Not Available	66.85%
Matrix_363	RAP2.3	Not Available	66.80%
Matrix_394	DREB_U	Not Available	66.63%
Matrix_478	AT1G01250	Not Available	66.60%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	66.45%
Matrix_14	ZCW32; AT5G62610	Not Available	66.19%
Matrix_86	CRF5; CRF6; CRF4	Not Available	65.90%
Matrix_109	GBF3	Not Available	65.80%
Matrix_448	ATERF6	Not Available	65.79%
Matrix_242	AT2G25820; AT3G16280; AT4G32800; TINY2; tny	Not Available	65.73%
Matrix_37	GATA27	Not Available	65.68%
Matrix_224	ERF1	Not Available	65.27%
Matrix_46	AT4G21895	Not Available	65.27%
Matrix_142	ZFP8	Not Available	65.18%
Matrix_433	ATERF1	Not Available	65.15%
Matrix_426	CRF1; CRF2	Not Available	65.14%
Matrix_141	AT3G25990	Not Available	65.11%
Matrix_463	HAT3.1	Not Available	65.11%
Matrix_296	GBF2	Not Available	65.02%
Matrix_221	SPL7	Not Available	64.97%
Matrix_147	ERF3; AT1G80580	Not Available	64.92%
Matrix_197	NAP	Not Available	64.75%
Matrix_171	LBD3; LBD4	Not Available	64.71%
Matrix_155	RAP2.6; ERF110; ABR1	Not Available	64.67%
Matrix_385	DEAR4	Not Available	64.56%
Matrix_331	GBF1	Not Available	64.38%
Matrix_146	ORA47	Not Available	64.32%
Matrix_288	RAP2.3	Not Available	64.15%
Matrix_234	RAP2.3	Not Available	64.03%
Matrix_300	bZIP68; bZIP16	Not Available	63.96%
Matrix_344	ATERF15; AT4G18450	Not Available	63.94%
Matrix_295	ERF1	Not Available	63.91%
Matrix_452	MYB46	Not Available	63.69%
Matrix_360	ORA59	Not Available	63.39%
Matrix_202	WRKY71; WRKY28; WRKY8	Not Available	62.91%
Matrix_307	RGL2; RGL3	Not Available	62.85%
Matrix_119	RRTF1	Not Available	62.85%
Matrix_223	MYB60; ATMYB31; ATMYB30; MYB94; MYBCOV1	Not Available	62.72%
Matrix_378	ATERF1	Not Available	62.44%
Matrix_272	DEAR4	Not Available	62.42%
Matrix_78	AT3G45610	Not Available	62.34%
Matrix_259	AT1G50680; AT1G51120	Not Available	62.33%
Matrix_84	AtGRF6	Not Available	62.18%
Matrix_70	GATA26	Not Available	62.15%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	62.08%
Matrix_389	ILR3	Not Available	61.88%
Matrix_263	WRKY33; WRKY19; WRKY32	Not Available	61.77%
Matrix_227	AT1G64620	Not Available	61.24%
Matrix_450	SPL7	Not Available	61.20%
Matrix_3	WRKY48	Not Available	61.02%
Matrix_99	DOF4.7	Not Available	61.01%
Matrix_341	HMGA	Not Available	60.91%
Matrix_190	ATERF1	Not Available	60.89%
Matrix_138	RRTF1	Not Available	60.68%
Matrix_12	EIN3; EIL2	Not Available	60.44%
Matrix_333	GATA3	Not Available	60.35%
Matrix_322	NST3; ANAC015; BRN2	Not Available	60.32%
Matrix_152	EIL1; AT5G65100	Not Available	60.21%
Matrix_233	MYC3	Not Available	60.19%
Matrix_75	WRKY29	Not Available	60.05%
Motif_371	DRE-like promoter motif	The Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental Stresses	60.02%
Matrix_154	AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130	Not Available	59.97%
Matrix_17	WRKY22	Not Available	59.93%
Matrix_473	RRTF1	Not Available	59.90%
Matrix_255	cdf3	Not Available	59.84%
Matrix_206	CUC1; ANAC100	Not Available	59.79%
Matrix_113	ABI5	Not Available	59.78%
Matrix_5	AT5G51190; ERF104	Not Available	59.65%
Matrix_120	BEE2	Not Available	59.52%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	59.41%
Matrix_370	WRKY50; WRKY51	Not Available	59.32%
Matrix_504	WRKY40	Not Available	59.31%
Matrix_476	bHLH115; bHLH34	Not Available	59.19%
Matrix_423	AT3G04030	Not Available	59.17%
Matrix_336	AT5G08520	Not Available	59.15%
Matrix_260	CAMTA3	Not Available	58.89%
Matrix_183	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	58.66%
Matrix_330	MYC2; TT8	Not Available	58.61%
Motif_50	AtERF-7; AtERF-4; AtERF-3; AtERF-1; AtERF-2; AtERF-5	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression. Role of an Arabidopsis AP2/EREBP-type transcriptional repressor in abscisic acid and drought stress responses	58.50%
Matrix_332	SPT; ALC	Not Available	58.44%
Matrix_248	ZFP5	Not Available	58.40%
Matrix_418	KNAT6; KNAT2	Not Available	58.34%
Matrix_122	ABF1; AREB2	Not Available	58.30%
Matrix_489	RAV1	Not Available	58.22%
Matrix_465	MYC4	Not Available	58.18%
Motif_457	AtERF-4; AtERF-3; AtERF-1; AtERF-2; AtERF-5	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	58.17%
Motif_60	AtERF-4; AtERF-3	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	58.16%
Matrix_41	anac058	Not Available	58.06%
Matrix_158	AT1G03040; LRL1; UNE12; LRL2; LRL3	Not Available	58.03%
Matrix_252	RAP2.6	Not Available	57.96%
Matrix_317	AT1G06070; AT2G31370; AT2G40620	Not Available	57.79%
Matrix_308	INO	Not Available	57.67%
Motif_625	AtERF-4; AtERF-3	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	57.59%
Matrix_437	MYC2	Not Available	57.50%
Matrix_365	AT1G10120; AT1G25330; CIB5; AT1G68920; AT3G23690; CIB1	Not Available	57.41%
Matrix_150	UNE10; PIF7	Not Available	57.34%
Matrix_35	YAB5; YAB3	Not Available	57.32%
Matrix_323	BIM3	Not Available	57.26%
Motif_37	AtERF-4	Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression	57.24%
Matrix_196	TCP20; AT5G41030	Not Available	57.22%
Matrix_256	IXR11; KNAT5; KNAT4; KNAT3	Not Available	57.06%
Matrix_241	HB-1; AT5G44180	Not Available	56.99%
Matrix_346	AtMYB70; MYB73	Not Available	56.95%
Matrix_23	ANAC46	Not Available	56.93%
Matrix_313	ATMYB65; MYB33	Not Available	56.93%
Matrix_384	ATWRKY17	Not Available	56.80%
Matrix_27	ATAIB; ATNIG1	Not Available	56.64%
Matrix_320	MYC4	Not Available	56.62%
Matrix_100	AT1G48610	Not Available	56.61%
Matrix_60	AT1G01260; AT5G57150	Not Available	56.59%
Matrix_420	ANAC58	Not Available	56.50%
Motif_344	MSACRCYM	MSA (M-specific activator) motif in Catharanthus roseus B-type cyclin (CYM) promoter; Essential for M phase-specific expression; Found at -66 to -58	56.40%
Matrix_137	SPL1; SPL12	Not Available	56.36%
Matrix_143	GATA14; GATA6; GATA5	Not Available	56.29%
Matrix_436	AT3G49930; AZF1	Not Available	56.15%
Matrix_490	AtMYB77; ATMYB44	Not Available	56.12%
Matrix_515	ddf2; ATCBF3; CBF1; CBF4	Not Available	56.08%
Matrix_449	BIM2	Not Available	55.88%
Matrix_177	ADOF2	Not Available	55.84%
Matrix_373	E2FE	Not Available	55.83%
Matrix_517	ERF12	Not Available	55.78%
Matrix_207	WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49	Not Available	55.77%
Matrix_446	LBD16	Not Available	55.68%
Motif_666	MYB binding site promoter	A flower-specific Myb protein activates transcription of phenylpropanoid biosynthetic genes	55.67%
Matrix_480	BES1	Not Available	55.63%
Matrix_200	PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815	Not Available	55.57%
Matrix_38	SPL14	Not Available	55.50%
Matrix_156	POC1	Not Available	55.42%
Matrix_500	WRKY43	Not Available	55.32%
Matrix_316	WRKY15; WRKY39; WRKY7; WRKY74	Not Available	55.32%
Matrix_505	GATA8	Not Available	55.09%
Matrix_503	AT2G37430; AT3G53600	Not Available	55.07%
Matrix_410	TOE2	Not Available	54.98%
Matrix_102	WRKY21	Not Available	54.98%
Matrix_286	GATA7	Not Available	54.94%
Matrix_226	GATA1	Not Available	54.92%
Matrix_406	ATERF-7	Not Available	54.82%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	54.81%
Matrix_239	AT5G04390	Not Available	54.75%
Matrix_416	ASL5	Not Available	54.68%
Matrix_311	TGA1	Not Available	54.61%
Matrix_508	APL; AT3G12730; AT3G24120; UNE16	Not Available	54.51%
Matrix_198	STZ; C2H2; AZF3	Not Available	54.49%
Matrix_249	WRKY11	Not Available	54.45%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	54.42%
Matrix_379	RHL41	Not Available	54.42%
Matrix_65	POC1; PIL1	Not Available	54.41%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	54.00%
Motif_354	VSF1PVGRP18	VSF-1 binding site in French bean grp1.8 gene promoter; VSF-1 is a tomato bZIP transcription factor; VSF-1 binding site is found in 28 bp vs-1 element; This sequence controls vascular gene expression in transgenic tobacco; VS-1 found in bean grp1.8 gene promoter; Located between -203 and -176; Partially overlaps with NRE; Confers xylem-specific expression	53.98%
Matrix_430	TOE2	Not Available	53.96%
Matrix_145	GBF4; AT5G44080	Not Available	53.92%
Motif_218	ABRERATCAL	ABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABRE	53.81%
Matrix_128	TGA2	Not Available	53.69%
Motif_94	UP1ATMSD	Up1 motif found in 162 of the 1184 up-regulated genes after main stem decapitation in Arabidopsis	53.66%
Matrix_479	TOE1	Not Available	53.61%
Matrix_220	WRKY18	Not Available	53.54%
Matrix_97	APRR2	Not Available	53.44%
Matrix_126	RBE	Not Available	53.43%
Matrix_85	SPL5	Not Available	53.41%
Matrix_462	ATERF-8	Not Available	53.36%
Motif_368	CBF1 BS in cor15a	Determinants in the sequence specific binding of two plant transcription factors, CBF1 and NtERF2, to the DRE and GCC motifs	53.35%
Matrix_157	LHY; RVE2	Not Available	53.31%
Matrix_164	AT1G02030; AT2G45120; AZF2; AT3G60580	Not Available	53.24%
Matrix_20	ANAC030; NST1; NAC066	Not Available	53.24%
Matrix_129	ABF1	Not Available	52.99%
Matrix_328	AT1G76580	Not Available	52.99%
Motif_54	LTREATLTI78	Putative low temperature responsive element (LTRE); Found in Arabidopsis thaliana low-temperature-induced (lti) genes, lti78 and lti65; Repeated four times in lti78 which is also known as cor78 and rd29A; Found also in barley low temperature responsive genes, blt4.2, blt4.6, blt4.9 (lipid transfer genes); cold inducible; See LTRECORE; Also present in rab18, kin1, and kin2; Differential expression of two related, low-temperature-induced genes in Arabidopsis thaliana	52.92%
Matrix_518	AT2G21230	Not Available	52.88%
Matrix_507	TCP3	Not Available	52.87%
Matrix_492	ETT	Not Available	52.85%
Matrix_402	TOE1	Not Available	52.82%
Matrix_314	WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52	Not Available	52.71%
Matrix_516	ANAC038; ANAC079	Not Available	52.58%
Matrix_398	TBP2; ATTRB2	Not Available	52.57%
Matrix_335	HSFB2A	Not Available	52.56%
Matrix_273	ANAC55	Not Available	52.30%
Matrix_472	ZN_C2_H2	Not Available	52.29%
Matrix_284	KAN2; KAN3; KAN; KAN4	Not Available	52.25%
Matrix_64	PIF5	Not Available	52.25%
Matrix_209	RAP2.6	Not Available	52.21%
Matrix_399	TGA1	Not Available	52.20%
Matrix_72	CDF2	Not Available	52.03%
Matrix_491	AT1G68670; AT3G25790	Not Available	51.99%
Matrix_380	ATMYR1	Not Available	51.95%
Matrix_319	TEM1	Not Available	51.91%
Motif_399	UPRMOTIFIAT	Motif I in the conserved UPR (unfolded protein response) cis-acting element in Arabidopsis genes coding for SAR1B, HSP-90, SBR-like, Ca-ATPase 4, CNX1, PDI, etc.	51.73%
Matrix_253	ETT	Not Available	51.65%
Matrix_174	ZAT2	Not Available	51.64%
Matrix_186	FHY3	Not Available	51.62%
Matrix_411	DOF5.6	Not Available	51.60%
Matrix_162	AtPHR1	Not Available	51.58%
Matrix_456	bZIP60	Not Available	51.36%
Motif_454	DRECRTCOREAT	Core motif of DRE/CRT (dehydration-responsive element/C-repeat) cis-acting element found in many genes in Arabidopsis and in rice; Os DREB1A bound to GCCGAC more preferentially than to ACCGAC whereas At DREB1A bound to both GCCGAC and ACCGAC efficiently; Maize ZmDREB1A bound to DRE; HaDREB2 in Helianthus annuus (sunflower)	51.17%
Matrix_34	RAV1_2	RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants	51.16%
Matrix_467	RAV1	Not Available	51.16%
Matrix_477	RAV1	Not Available	51.16%
Matrix_26	ATMYB3; MYB24	Not Available	50.98%
Matrix_53	MYC3	Not Available	50.90%
Matrix_274	EDF3	Not Available	50.82%
Motif_233	DRE1COREZMRAB17	DRE1 core found in maize rab17 gene promoter; DRE1 was protected, in in vivo footprinting, by a protein in embryos specifically, but in leaves, was protected when was treated with ABA and drought; rab17 is expressed during late embryogenesis, and is induced by ABA	50.80%
Matrix_90	BEE1; BEE3; AT3G07340; AT5G48560; AT5G50915	Not Available	50.77%
Matrix_69	AT2G03500	Not Available	50.77%
Matrix_104	PI	Not Available	50.73%
Motif_254	MYB46; MYB83	MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes	50.68%
Matrix_400	MYB46	MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes	50.68%
Matrix_486	MYB83	MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes	50.68%
Matrix_166	TGA4	Not Available	50.66%
Matrix_312	ARF11; MP; ARF6; IAA21; ARF8; ARF4	Not Available	50.65%
Matrix_425	TIFY2A	Not Available	50.58%
Matrix_199	AT1G69170; SPL9; SPL15; SPL13A; SPL13B	Not Available	50.57%
Matrix_111	ABF3	Not Available	50.55%
Matrix_519	ATDOF2.4	Not Available	50.49%
Matrix_502	AT3G13040	Not Available	50.42%
Matrix_165	KNAT1	Not Available	50.40%
Matrix_159	TEM2	Not Available	50.29%
Matrix_195	GATA2; GATA4	Not Available	50.27%
Matrix_114	EPR1; AT3G10113	Not Available	50.22%
Motif_249	DPBF1&2 binding site motif	A novel class of bZIP transcription factors, DPBF-1 and 2 (Dc3 promoter-binding factor-1 and 2) binding core sequence; Found in the carrot Dc3 gene promoter; Dc3 expression is normally embryo-specific, and also can be induced by ABA; The Arabidopsis abscisic acid response gene ABI5 encodes a bZIP transcription factor; abi5 mutant have a pleiotropic defects in ABA response; ABI5 regulates a subset of late embryogenesis-abundant genes; GIA1 (growth-insensitivity to ABA) is identical to ABI5; Isolation of a novel class of bZIP transcription factors that interact with ABA-responsive and embryo-specification elements in the Dc3 promoter using a modified yeast one-hybrid system	50.13%
Matrix_469	NAC041; NAC083	Not Available	50.05%
Matrix_432	AT1G77920	Not Available	50.00%