PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_109
Name: GBF3
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_331	GBF1	Not Available	92.68%
Matrix_300	bZIP68; bZIP16	Not Available	85.28%
Matrix_296	GBF2	Not Available	84.43%
Matrix_80	BIM1	Not Available	82.31%
Matrix_317	AT1G06070; AT2G31370; AT2G40620	Not Available	80.25%
Matrix_156	POC1	Not Available	78.07%
Matrix_518	AT2G21230	Not Available	73.48%
Matrix_418	KNAT6; KNAT2	Not Available	72.53%
Matrix_59	AT4G00238; AT4G00250	Not Available	72.50%
Matrix_122	ABF1; AREB2	Not Available	72.42%
Matrix_206	CUC1; ANAC100	Not Available	72.13%
Matrix_227	AT1G64620	Not Available	71.87%
Matrix_463	HAT3.1	Not Available	71.72%
Matrix_14	ZCW32; AT5G62610	Not Available	70.91%
Matrix_226	GATA1	Not Available	70.52%
Matrix_101	ERF5	Not Available	70.09%
Matrix_480	BES1	Not Available	70.05%
Matrix_256	IXR11; KNAT5; KNAT4; KNAT3	Not Available	70.03%
Matrix_286	GATA7	Not Available	69.26%
Matrix_377	AT1G75490; DREB2C; AT2G40350; AT5G18450	Not Available	69.22%
Matrix_308	INO	Not Available	68.95%
Matrix_12	EIN3; EIL2	Not Available	68.93%
Matrix_120	BEE2	Not Available	68.92%
Matrix_449	BIM2	Not Available	68.82%
Matrix_465	MYC4	Not Available	68.70%
Matrix_287	ERF2	Not Available	68.69%
Matrix_330	MYC2; TT8	Not Available	68.60%
Matrix_321	HRD	Not Available	68.43%
Matrix_91	CRF3	Not Available	68.26%
Matrix_323	BIM3	Not Available	68.07%
Matrix_493	AT1G22985; AT1G71130	Not Available	67.86%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	67.82%
Matrix_151	ASIL1	Not Available	67.78%
Matrix_200	PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815	Not Available	67.68%
Matrix_374	AT5G07580; AT5G61590	Not Available	67.66%
Matrix_158	AT1G03040; LRL1; UNE12; LRL2; LRL3	Not Available	67.59%
Matrix_188	SPL4	Not Available	67.54%
Matrix_41	anac058	Not Available	67.38%
Matrix_389	ILR3	Not Available	67.06%
Matrix_195	GATA2; GATA4	Not Available	66.81%
Matrix_171	LBD3; LBD4	Not Available	66.79%
Matrix_408	GATA12	Not Available	66.43%
Matrix_406	ATERF-7	Not Available	65.81%
Matrix_104	PI	Not Available	65.80%
Matrix_181	Dof5.7	Not Available	65.68%
Matrix_261	ATERF-1	Not Available	65.58%
Matrix_259	AT1G50680; AT1G51120	Not Available	65.50%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	65.29%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	65.07%
Matrix_446	LBD16	Not Available	65.05%
Matrix_307	RGL2; RGL3	Not Available	65.00%
Matrix_17	WRKY22	Not Available	64.85%
Matrix_502	AT3G13040	Not Available	64.84%
Matrix_333	GATA3	Not Available	64.80%
Matrix_271	AT3G16350	Not Available	63.94%
Matrix_462	ATERF-8	Not Available	63.93%
Matrix_141	AT3G25990	Not Available	63.84%
Matrix_72	CDF2	Not Available	63.83%
Matrix_85	SPL5	Not Available	63.77%
Matrix_501	DAG2	Not Available	63.77%
Matrix_450	SPL7	Not Available	63.76%
Matrix_169	E2F1	Not Available	63.74%
Matrix_129	ABF1	Not Available	63.62%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	63.52%
Matrix_380	ATMYR1	Not Available	63.48%
Matrix_221	SPL7	Not Available	62.93%
Matrix_343	AT2G33710	Not Available	62.91%
Matrix_55	PIF3	Not Available	62.89%
Matrix_75	WRKY29	Not Available	62.70%
Matrix_313	ATMYB65; MYB33	Not Available	62.52%
Matrix_37	GATA27	Not Available	62.36%
Matrix_233	MYC3	Not Available	62.34%
Matrix_404	OBP4	Not Available	62.26%
Matrix_315	MYB111	Not Available	62.16%
Matrix_108	PIF4	Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses	62.13%
Matrix_243	RAP2.12; RAP2.2	Not Available	62.01%
Matrix_456	bZIP60	Not Available	61.99%
Matrix_70	GATA26	Not Available	61.95%
Matrix_58	WRKY55; ATWRKY54; WRKY46; WRKY70; AtWRKY41; WRKY53; WRKY30	Not Available	61.86%
Matrix_46	AT4G21895	Not Available	61.78%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	61.76%
Matrix_424	MYB59	Not Available	61.74%
Matrix_515	ddf2; ATCBF3; CBF1; CBF4	Not Available	61.73%
Matrix_143	GATA14; GATA6; GATA5	Not Available	61.71%
Matrix_447	RVE1	Not Available	61.34%
Matrix_337	MYB46	Not Available	61.31%
Matrix_152	EIL1; AT5G65100	Not Available	61.31%
Matrix_511	AT1G05805; AT1G35460; AT1G51140; AT2G42280; AT2G43140; AT4G09180	Not Available	61.15%
Matrix_469	NAC041; NAC083	Not Available	61.15%
Matrix_263	WRKY33; WRKY19; WRKY32	Not Available	61.07%
Matrix_355	ERF10; ERF11	Not Available	61.02%
Matrix_196	TCP20; AT5G41030	Not Available	60.96%
Matrix_135	ABI3	Not Available	60.92%
Matrix_7	PIF4	Not Available	60.89%
Matrix_328	AT1G76580	Not Available	60.82%
Matrix_128	TGA2	Not Available	60.80%
Matrix_326	AT5G07310; Rap2.6L; AT5G61890	Not Available	60.79%
Matrix_113	ABI5	Not Available	60.74%
Matrix_255	cdf3	Not Available	60.64%
Matrix_164	AT1G02030; AT2G45120; AZF2; AT3G60580	Not Available	60.59%
Matrix_311	TGA1	Not Available	60.58%
Matrix_351	HAT9; ATHB-4; ATHB2; HAT22; HAT14	Not Available	60.55%
Matrix_212	ATHB-12	Not Available	60.54%
Matrix_199	AT1G69170; SPL9; SPL15; SPL13A; SPL13B	Not Available	60.43%
Matrix_284	KAN2; KAN3; KAN; KAN4	Not Available	60.33%
Matrix_437	MYC2	Not Available	60.32%
Matrix_395	AT1G19210; ORA47; AT4G31060; AT5G21960	Not Available	60.28%
Matrix_476	bHLH115; bHLH34	Not Available	60.28%
Matrix_154	AT1G22190; AT1G36060; AT1G64380; RAP2.4; AT2G20880; AT2G22200; AT4G13620; AT4G28140; AT4G39780; AT5G65130	Not Available	60.28%
Matrix_3	WRKY48	Not Available	60.19%
Matrix_370	WRKY50; WRKY51	Not Available	60.18%
Matrix_489	RAV1	Not Available	60.17%
Matrix_312	ARF11; MP; ARF6; IAA21; ARF8; ARF4	Not Available	60.13%
Matrix_431	ATHB21; HB-3	Not Available	59.93%
Matrix_420	ANAC58	Not Available	59.92%
Matrix_434	ARR11	Not Available	59.89%
Matrix_416	ASL5	Not Available	59.88%
Matrix_423	AT3G04030	Not Available	59.88%
Matrix_322	NST3; ANAC015; BRN2	Not Available	59.84%
Matrix_265	NGA3	Not Available	59.82%
Matrix_193	RAV1	Not Available	59.82%
Matrix_97	APRR2	Not Available	59.77%
Matrix_234	RAP2.3	Not Available	59.72%
Matrix_440	LFY	Not Available	59.68%
Matrix_99	DOF4.7	Not Available	59.67%
Matrix_142	ZFP8	Not Available	59.51%
Matrix_198	STZ; C2H2; AZF3	Not Available	59.44%
Matrix_190	ATERF1	Not Available	59.42%
Matrix_93	YAB5	Not Available	59.36%
Matrix_508	APL; AT3G12730; AT3G24120; UNE16	Not Available	59.31%
Matrix_126	RBE	Not Available	59.21%
Matrix_204	WOX13	Not Available	59.18%
Matrix_334	AT3G23230	Not Available	59.15%
Matrix_379	RHL41	Not Available	59.07%
Matrix_505	GATA8	Not Available	59.05%
Matrix_258	WOX13	Not Available	58.99%
Matrix_78	AT3G45610	Not Available	58.98%
Matrix_436	AT3G49930; AZF1	Not Available	58.98%
Matrix_60	AT1G01260; AT5G57150	Not Available	58.97%
Matrix_153	AP2	Not Available	58.96%
Matrix_230	ARR11	Not Available	58.90%
Matrix_503	AT2G37430; AT3G53600	Not Available	58.83%
Matrix_137	SPL1; SPL12	Not Available	58.81%
Matrix_336	AT5G08520	Not Available	58.75%
Matrix_22	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	58.55%
Matrix_299	PFG3	Not Available	58.53%
Matrix_150	UNE10; PIF7	Not Available	58.53%
Matrix_145	GBF4; AT5G44080	Not Available	58.50%
Matrix_167	ZAT6	Not Available	58.42%
Matrix_239	AT5G04390	Not Available	58.40%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	58.24%
Matrix_433	ATERF1	Not Available	58.17%
Matrix_116	ANAC55	Not Available	58.05%
Matrix_415	WRKY27	Not Available	57.86%
Matrix_454	AT1G77200; ATERF38; AT4G16750; AT5G52020	Not Available	57.82%
Matrix_365	AT1G10120; AT1G25330; CIB5; AT1G68920; AT3G23690; CIB1	Not Available	57.81%
Matrix_64	PIF5	Not Available	57.79%
Matrix_507	TCP3	Not Available	57.79%
Matrix_320	MYC4	Not Available	57.74%
Matrix_155	RAP2.6; ERF110; ABR1	Not Available	57.72%
Matrix_350	ARR14	Not Available	57.64%
Matrix_177	ADOF2	Not Available	57.58%
Matrix_491	AT1G68670; AT3G25790	Not Available	57.46%
Matrix_472	ZN_C2_H2	Not Available	57.45%
Matrix_23	ANAC46	Not Available	57.44%
Matrix_335	HSFB2A	Not Available	57.43%
Matrix_384	ATWRKY17	Not Available	57.38%
Matrix_332	SPT; ALC	Not Available	56.76%
Matrix_161	MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570	Not Available	56.72%
Matrix_475	AT5G64220	Not Available	56.62%
Matrix_409	DEAR3	Not Available	56.61%
Matrix_182	ATHB6	Not Available	56.60%
Matrix_50	ATERF14; AT5G43410	Not Available	56.56%
Matrix_248	ZFP5	Not Available	56.56%
Matrix_69	AT2G03500	Not Available	56.55%
Matrix_273	ANAC55	Not Available	56.53%
Matrix_254	MYB52	Not Available	56.41%
Matrix_36	RAV1_1	RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants	56.40%
Matrix_247	PIF3	Not Available	56.10%
Matrix_57	WIN1; SHN3; SHN2	Not Available	56.08%
Matrix_183	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	56.06%
Matrix_53	MYC3	Not Available	56.01%
Matrix_373	E2FE	Not Available	55.87%
Matrix_166	TGA4	Not Available	55.71%
Matrix_8	KAN1	Not Available	55.68%
Matrix_378	ATERF1	Not Available	55.64%
Matrix_362	DEAR3	Not Available	55.58%
Matrix_452	MYB46	Not Available	55.56%
Matrix_26	ATMYB3; MYB24	Not Available	55.55%
Matrix_79	FUS3	Not Available	55.30%
Matrix_229	CDC5	A cdc5+ homolog of a higher plant, Arabidopsis thaliana	55.25%
Matrix_455	MYB111	Not Available	55.21%
Matrix_114	EPR1; AT3G10113	Not Available	55.17%
Matrix_432	AT1G77920	Not Available	55.07%
Motif_399	UPRMOTIFIAT	Motif I in the conserved UPR (unfolded protein response) cis-acting element in Arabidopsis genes coding for SAR1B, HSP-90, SBR-like, Ca-ATPase 4, CNX1, PDI, etc.	55.04%
Matrix_27	ATAIB; ATNIG1	Not Available	54.83%
Matrix_106	AT5G47390	Not Available	54.82%
Matrix_209	RAP2.6	Not Available	54.81%
Matrix_210	ARR1	Not Available	54.74%
Matrix_102	WRKY21	Not Available	54.70%
Matrix_186	FHY3	Not Available	54.69%
Matrix_306	TGA1	TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG	54.67%
Matrix_174	ZAT2	Not Available	54.66%
Matrix_399	TGA1	Not Available	54.60%
Matrix_4	ARR14	Not Available	54.58%
Matrix_207	WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49	Not Available	54.53%
Matrix_473	RRTF1	Not Available	54.52%
Matrix_341	HMGA	Not Available	54.42%
Matrix_67	GLK1	Not Available	54.41%
Matrix_411	DOF5.6	Not Available	54.39%
Matrix_448	ATERF6	Not Available	54.39%
Matrix_45	DRN	Not Available	54.36%
Matrix_392	ARR2	Not Available	54.33%
Matrix_162	AtPHR1	Not Available	54.30%
Matrix_146	ORA47	Not Available	54.24%
Motif_116	INRNTPSADB	Inr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA box	54.23%
Matrix_211	MYB3	Not Available	54.17%
Matrix_33	SPL11; SPL10; SPL2	Not Available	54.08%
Matrix_484	ATERF13	Not Available	54.05%
Motif_473	ABREOSRGA1	ABRE (ABA responsive element) in rice RGA1 encoding a G protein alpha subunit;ABRE; ABA and water-stress responses; Found in maize rab28; maize rab28 is ABA-inducible in embryos and vegetative tissues; Found in the Arabidopsis (A.t.) alcohol dehydrogenase (Adh) gene promoter; ABRE2; Found in the maize (Z.m.) Cat1 gene promoter; Responsible for the induction by ABA; Binding site of CBF2; Arabidopsis CBF1 overexpression induces COR genes and enhances freezing tolerance; The CBF genes do not appear to be autoregulated through the CRT/DRE sequence;The cis-regulatory element CCACGTGG is involved in ABA and water-stress responses of the maize gene rab28. Characterization of a maize G-box binding factor that is induced by hypoxia	54.05%
Matrix_346	AtMYB70; MYB73	Not Available	54.05%
Matrix_512	HAT3	Not Available	53.99%
Matrix_249	WRKY11	Not Available	53.97%
Matrix_20	ANAC030; NST1; NAC066	Not Available	53.93%
Matrix_425	TIFY2A	Not Available	53.87%
Matrix_84	AtGRF6	Not Available	53.87%
Matrix_144	AT5G08330; AT5G23280	Not Available	53.62%
Matrix_90	BEE1; BEE3; AT3G07340; AT5G48560; AT5G50915	Not Available	53.60%
Matrix_21	HSFC1	Not Available	53.59%
Matrix_197	NAP	Not Available	53.59%
Matrix_88	AHL12	Not Available	53.55%
Matrix_361	AT1G25550	Not Available	53.47%
Matrix_61	ATCBF3	Not Available	53.45%
Matrix_111	ABF3	Not Available	53.45%
Matrix_185	AHL25	Not Available	53.41%
Matrix_241	HB-1; AT5G44180	Not Available	53.41%
Matrix_157	LHY; RVE2	Not Available	53.38%
Matrix_110	ATABI4; AT3G57600	Not Available	53.17%
Motif_311	ANAC019; ANAC055; ANAC072	Isolation and functional analysis of Arabidopsis stress-inducible NAC transcription factors that bind to a drought-responsive cis-element in the early responsive to dehydration stress 1 promoter	53.06%
Matrix_282	bZIP60	Not Available	53.05%
Matrix_38	SPL14	Not Available	53.02%
Matrix_490	AtMYB77; ATMYB44	Not Available	53.01%
Matrix_344	ATERF15; AT4G18450	Not Available	52.85%
Matrix_494	OBP4	Not Available	52.82%
Matrix_35	YAB5; YAB3	Not Available	52.82%
Matrix_316	WRKY15; WRKY39; WRKY7; WRKY74	Not Available	52.81%
Matrix_272	DEAR4	Not Available	52.79%
Matrix_31	SPL1	Not Available	52.77%
Matrix_77	PRR5	Not Available	52.73%
Matrix_500	WRKY43	Not Available	52.68%
Matrix_451	STY1	Not Available	52.66%
Matrix_391	AHL20	Not Available	52.65%
Matrix_225	MYB52	Not Available	52.60%
Matrix_16	AT3G04450; PHL1	Not Available	52.56%
Matrix_65	POC1; PIL1	Not Available	52.42%
Matrix_252	RAP2.6	Not Available	52.18%
Matrix_430	TOE2	Not Available	52.08%
Motif_94	UP1ATMSD	Up1 motif found in 162 of the 1184 up-regulated genes after main stem decapitation in Arabidopsis	52.04%
Matrix_6	AT1G70000	Not Available	52.02%
Matrix_314	WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52	Not Available	52.00%
Matrix_202	WRKY71; WRKY28; WRKY8	Not Available	51.80%
Matrix_521	AHL20	Not Available	51.78%
Matrix_519	ATDOF2.4	Not Available	51.76%
Matrix_324	AT2G01060	Not Available	51.74%
Motif_120	ABRETAEM	ABRE (ABA responsive element) found in wheat Em gene; transacting factor: EMBP-1; EMBP-1 binds to CACGTGGC	51.74%
Matrix_203	GATA9; GATA12	Not Available	51.66%
Matrix_460	NAM; anac025; ATNAC2	Not Available	51.62%
Matrix_237	MYB55	Not Available	51.62%
Matrix_402	TOE1	Not Available	51.59%
Matrix_147	ERF3; AT1G80580	Not Available	51.57%
Matrix_220	WRKY18	Not Available	51.56%
Matrix_176	MYB98	Not Available	51.46%
Matrix_366	ARR14	Not Available	51.44%
Matrix_165	KNAT1	Not Available	51.41%
Matrix_178	HSFB2A	Not Available	51.38%
Matrix_131	HDG12; EDT1; GL2; HDG8	Not Available	51.37%
Matrix_52	ZAT18	Not Available	51.35%
Matrix_339	bHLH104	Not Available	51.34%
Matrix_87	AT1G19000	Not Available	51.33%
Matrix_168	AHL25	Not Available	51.32%
Motif_598	SORLIP3AT	one of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; See also all SORLIPs and also all SORLREPs; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data	51.26%
Matrix_278	AtbZIP44	Not Available	51.24%
Matrix_92	AT1G33760	Not Available	51.19%
Motif_379	ABRECE1HVA22	CE1(coupling element 1) of barley HVA22 gene; possible binding site for nuclear bZIP protein; ABA responsive complex consists of a G-box, namely ABRE3 (GCCACGTACA), and CE1	51.15%
Motif_541	AtSR1	A calmodulin-binding/CGCG box DNA-binding protein family involved in multiple signaling pathways in plants	51.08%
Matrix_360	ORA59	Not Available	51.06%
Matrix_457	TGA2	Not Available	51.03%
Matrix_483	ICU4	Not Available	51.03%
Matrix_461	ATHB12	Not Available	50.90%
Matrix_419	TGA9; PAN; TGA6; bZIP65	Not Available	50.89%
Matrix_19	PIF5	Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling	50.83%
Matrix_277	RAP2.6	Not Available	50.79%
Matrix_354	AHL12	Not Available	50.76%
Motif_344	MSACRCYM	MSA (M-specific activator) motif in Catharanthus roseus B-type cyclin (CYM) promoter; Essential for M phase-specific expression; Found at -66 to -58	50.74%
Motif_118	CAATBOX2	CAAT box found in the 5' upstream region (-80) of many eukaryotic genes; GGC(or T)CAATCT	50.72%
Matrix_498	AT2G28710; AT3G46070; AT3G46080; ZAT7	Not Available	50.62%
Matrix_257	NAC050; ANAC051; anac057; NAC2	Not Available	50.62%
Matrix_40	TCP2	Not Available	50.57%
Matrix_223	MYB60; ATMYB31; ATMYB30; MYB94; MYBCOV1	Not Available	50.48%
Matrix_398	TBP2; ATTRB2	Not Available	50.44%
Matrix_295	ERF1	Not Available	50.43%
Motif_438	CAMTA5; CAMTA1; CAMTA2; CAMTA3	Roles for Arabidopsis CAMTA transcription factors in cold-regulated gene expression and freezing tolerance	50.41%
Motif_92	ABREATRD22	ABRE (ABA responsive element) in Arabidopsis dehydration-responsive gene rd22	50.39%
Matrix_487	AT1G29160	Not Available	50.25%
Matrix_274	EDF3	Not Available	50.19%
Matrix_100	AT1G48610	Not Available	50.17%
Matrix_201	AT1G74840	Not Available	50.16%
Matrix_410	TOE2	Not Available	50.15%
Matrix_340	HSFC1	Not Available	50.09%
Matrix_347	WOX14; WOX10	Not Available	50.08%
Motif_162	ABRE3HVA22	ABRE3 of barley HVA22 gene; G-box; component of ABA response complex in HVA22 gene; ABA response complex 1(ABRC1)=A3(previously designated ABRE3)+CE1	50.06%