TRAPID is an online tool for the fast, reliable and user-friendly analysis of de novo transcriptomes.
Through a highly optimized processing pipeline the TRAPID system offers functional and comparative analyses for transcriptome data sets. TRAPID is highly competitive with respect to other existing solutions with regards to both speed and quality.
TRAPID 2.0 currently offers the following features:
More information about these features and a comprehensive overview of the TRAPID capabilities can be found in the documentation.
2022-11-26: A planned maintenance will occur next Thursday, the 1st of December, at 3:30PM UTC. TRAPID will be offline during this process.
2022-11-26: fixed MSAviewer loading bug.
2022-10-25: fixed a configuration issue causing recent EggNOG experiments to be unable to complete.
2021-05-21: Next Tuesday, the 25th of May, TRAPID will be offline during the day for maintenance.
2021-05-05: fixed a bug causing some protein sequence export files to be truncated (due to transcripts having no predicted ORF sequence).
2021-04-22: fixed a bug that was causing an incorrect number of transcripts to be selected when creating subsets from the taxonomic classification visualizations, and some full taxon paths to not be printed in exported files.
2021-03-23: a new reference database is available, PLAZA diatoms 1.0!