IGR sequence:igr3097#chr5#x1=15478185#l=2723
Mature miRNA sequence:CAGCCAAGGAUGACUUGCCGG
encoded miRNA:MIR87c
Precursor location:662 - 874 (negative strand)
precursor length:213 (73 basepairs)
MIR position:1 - 21 (854 - 874)
MIR length:21 (19 paired bases)
miRNA location TIGR v3:chr5:15478846<15479058
miRNA location TIGR v5:chr5:15887904<15888116
Folding energy:-70.32
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** ********** *                                           
CAGCCAAGGA UGACUUGCCG GUAGCUUGUA UUAUGAUUAC UCUAUAUUCG AUUUAUAUUA    60
:(((((-((( (((((((((( ((((((((,, ,,<<-<<<<< <<<<<<____ ________>> 

                                                                  
UGGAGAUGAU GGUUUAUAUA UAUUUACUUA UCUACAUAGU UUUAGUUGAU UUUUUUUCGU   120
>>>>>->>>> ->>,,,,,<< <<<<<-<<<< -<<<<<<<-- ---<<<-<<< -<<<<<<<<< 

                                                                  
ACGUAAUAUA AUACGAAAAA GUAUUUACUU AUUUAUAUAU GUGUGUUGGG GCAAGAAGUG   180
<_________ _>>>>>>>>> >->>>->>>- ------->>> >>>->->>>> ----->>>>> 

                                    
UAACCAAGCU AGCCCGGCAA GUCAUCUAUG GCU  213
>>,,)))))) )--))))))) )))))))-)) )))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs