IGR sequence:igr3097#chr5#x1=15478185#l=2723
Mature miRNA sequence:UACCGGCAAGUCAUCCUUGGCUG
encoded miRNA:MIR86a
Precursor location:661 - 874 (positive strand)
precursor length:214 (50 basepairs)
MIR position:192 - 214 (852 - 874)
MIR length:23 (21 paired bases)
miRNA location TIGR v3:chr5:15478845>15479058
miRNA location TIGR v5:chr5:15887903>15888116
Folding energy:-58.00
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
UAGCCAUAGA UGACUUGCCG GGCUAGCUUG GUUACACUUC UUGCCCCAAC ACACAUAUAU    60
((((((--(( (((((((((( (--((((((( ,,,,,,,,,, ,,,,,,,,,, ,,,,<<<<<< 

                                                                  
AAAUAAGUAA AUACUUUUUC GUAUUAUAUU ACGUACGAAA AAAAAUCAAC UAAAACUAUG   120
<,,,,,,,,, ,,,,[[[[[[ [[[[______ __]]]]]]]] ]],,[[[-[[ _________] 

                                                                  
UAGAUAAGUA AAUAUAUAUA AACCAUCAUC UCCAUAAUAU AAAUCGAAUA UAGAGUAAUC   180
]-]]],,,,, ,,>>>>>>>, ,,,,,,,,,, ,,,,,,,,,, ,,,,,,,,,, ,,[[____]] 

            ********* ********** ****
AUAAUACAAG CUACCGGCAA GUCAUCCUUG GCUG  214
,,,,,,)))) )))))))))) ))))))--)) ))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs