IGR sequence: | igr2959#chr2#x1=14390339#l=3764 |
---|---|
Mature miRNA sequence: | GGGCAAAUCUCCUUUGGCAG |
encoded miRNA: | MIR66a |
Precursor location: | 3137 - 3230 (negative strand) |
precursor length: | 94 (35 basepairs) |
MIR position: | 1 - 20 (3211 - 3230) |
MIR length: | 20 (18 paired bases) |
miRNA location TIGR v3: | chr2:14393475<14393568 |
miRNA location TIGR v5: | chr2:14452088<14452181 |
Folding energy: | -39.90 |
BLAST hit against RFAM Atha miRNAs: | none |
Belongs to miRNAs-targets cluster: | none |
Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.
********** ********** GGGCAAAUCU CCUUUGGCAG AGAGCUCACC ACAAACAUUU AUGCAUAUGA UGCAAGAAUG 60 (((((((((- ((-((((((( (((-((---- ((---((((( -(((((___) ))))-))))) AAGUAAUAGA UCUCUGCCAA UGGUGAUCUU GCCC 94 --))---))- )))))))))) -))-)))-)) ))))
Postscript file CT file PNG file fasta file Stockholm file
Targets:
No Targets found for this miRNA
Rice homologs
- gnl|BL_ORD_ID|560_99071-99164_1-20
- gnl|BL_ORD_ID|560_99071+99164_75-94