IGR sequence: | igr2959#chr2#x1=14390339#l=3764 |
---|---|
Mature miRNA sequence: | GGCAAAUCUCCUUUGGCAGA |
encoded miRNA: | MIR67c |
Precursor location: | 1645 - 1727 (negative strand) |
precursor length: | 83 (26 basepairs) |
MIR position: | 1 - 20 (1708 - 1727) |
MIR length: | 20 (16 paired bases) |
miRNA location TIGR v3: | chr2:14391983<14392065 |
miRNA location TIGR v5: | chr2:14450596<14450678 |
Folding energy: | -31.47 |
BLAST hit against RFAM Atha miRNAs: | none |
Belongs to miRNAs-targets cluster: | none |
Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.
********** ********** GGCAAAUCUC CUUUGGCAGA GGAAAAUGAU GAGAAAAUAA CAUAUAAGGG UCAUCAACUU 60 (((-((((-- (((((((((- ((((--(((( ((________ __________ ))))))--)) CCACUGCCAA UAGAGGAUUC GCC 83 ))-))))))) -))--))))- )))
Postscript file CT file PNG file fasta file Stockholm file
Targets:
No Targets found for this miRNA
Rice homologs
- gnl|BL_ORD_ID|302_10012-10104_1-20
- gnl|BL_ORD_ID|302_10012+10104_74-93
- gnl|BL_ORD_ID|289_138591-138683_1-20
- gnl|BL_ORD_ID|289_138591+138683_74-93