IGR sequence: | igr2959#chr2#x1=14390339#l=3764 |
---|---|
Mature miRNA sequence: | CUCUGCCAAAGGAGAUUUGCC |
encoded miRNA: | MIR67a |
Precursor location: | 1645 - 1727 (positive strand) |
precursor length: | 83 (31 basepairs) |
MIR position: | 63 - 83 (1707 - 1727) |
MIR length: | 21 (19 paired bases) |
miRNA location TIGR v3: | chr2:14391983>14392065 |
miRNA location TIGR v5: | chr2:14450596>14450678 |
Folding energy: | -37.90 |
BLAST hit against RFAM Atha miRNAs: | none |
Belongs to miRNAs-targets cluster: | none |
Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.
GGCGAAUCCU CUAUUGGCAG UGGAAGUUGA UGACCCUUAU AUGUUAUUUU CUCAUCAUUU 60 ((((((((-( ((-((((((( -(((((-((( (((----((_ ____))---- -))))))-)) ******** ********** *** UCCUCUGCCA AAGGAGAUUU GCC 83 )))-)))))) )-)))))))) )))
Postscript file CT file PNG file fasta file Stockholm file
Targets:
No Targets found for this miRNA
Rice homologs
- gnl|BL_ORD_ID|123_110923-111012_1-21
- gnl|BL_ORD_ID|123_110923+111012_70-90