IGR sequence:igr2953#chr2#x1=14363467#l=4130
Mature miRNA sequence:CCUCCGUUUUAUAAUAUAAG
encoded miRNA:MIR4c
Precursor location:329 - 538 (negative strand)
precursor length:210 (69 basepairs)
MIR position:1 - 20 (519 - 538)
MIR length:20 (19 paired bases)
miRNA location TIGR v3:chr2:14363795<14364004
miRNA location TIGR v5:chr2:14422408<14422617
Folding energy:-52.30
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** **********                                             
CCUCCGUUUU AUAAUAUAAG UUGUUAUAGA CCAAAUUUUU UGUUUCACAC UAUAAAUUGU    60
:((((((((( (((((((((( (((((-(((, ,,<<<<--<< <<<_______ _>>>>>-->> 

                                                                  
UUUCAAGUUU UUAUGCAAGU UAUAUAUUAC UUUAAUACUU UAUGAUUAUU UAUAUUUUAC   120
>>,,,,,,,, ,<<<<<<-<< <<<<<<<<<< <<<,,,,,,, [[[[[____] ]]]],,,,,[ 

                                                                  
AGUCUCUUUU AUGAUUGGCU GAACUUUUUA AAAGUUAAUA UGCUUAAUAU GUGUGUUUUU   180
[[[[[[____ __]]--]]]] ],,,,,,,,, >>>>->>>>> >>-->>>>-> >>>>>,,,,, 

                                 
AGCUAAAACA ACUUAUAUUG UGAAACGGAG   210
,,)))-)))) )))))))))) ))))))))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs