IGR sequence:igr2953#chr2#x1=14363467#l=4130
Mature miRNA sequence:CAACUUAUAUUAUAAAACGGAGG
encoded miRNA:MIR4a
Precursor location:328 - 538 (positive strand)
precursor length:211 (56 basepairs)
MIR position:189 - 211 (516 - 538)
MIR length:23 (20 paired bases)
miRNA location TIGR v3:chr2:14363794>14364004
miRNA location TIGR v5:chr2:14422407>14422617
Folding energy:-39.97
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
UCUCCGUUUC ACAAUAUAAG UUGUUUUAGC UAAAAACACA CAUAUUAAGC AUAUUAACUU    60
:((((((((- (-(((((((( (((((-(((( ((((--(((( (,,,,,,,,, ,,,,,,,<<< 

                                                                  
UUAAAAAGUU CAGCCAAUCA UAAAAGAGAC UGUAAAAUAU AAAUAAUCAU AAAGUAUUAA   120
<<<_______ __________ >>>>>>,,,, ,,,,,,,<<< <<<<------ -<<<<----- 

                                                                  
AGUAAUAUAU AACUUGCAUA AAAACUUGAA AACAAUUUAU AGUGUGAAAC AAAAAAUUUG   180
-<<<<_____ ___>>>>--- --->>>>--- ---->>>>>> >)))))---- ------)))) 

        ** ********** ********** *
GUCUAUAACA ACUUAUAUUA UAAAACGGAG G  211
)-)))-)))) )))))))))- )-)))))))) :

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs