IGR sequence:igr2835#chr5#x1=14105322#l=9222
Mature miRNA sequence:CUUAUAUUGUAAAACGGAGGG
encoded miRNA:MIR51m
Precursor location:3187 - 3384 (positive strand)
precursor length:198 (71 basepairs)
MIR position:178 - 198 (3364 - 3384)
MIR length:21 (20 paired bases)
miRNA location TIGR v3:chr5:14049208>14049405 chr5:14108508>14108705
miRNA location TIGR v5:chr5:14458266>14458463 chr5:14517566>14517763
Folding energy:-54.40
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
CCCUCUGUUU CAUAAUAUAA GUUGUUUUAG ACCAAUUUUU UUGUUUUACA AGAAAAGUUA    60
(((((((((( -((((((((( (((((((((( ,,,,,<<<<< <<<_____>> >>>>>>,<<< 

                                                                  
UUUUCUAGUU UCUAUGCAAA UUAUAUGUUA CUUUAAUAUU UUAUGAUUAC UUAUAUUAUU   120
<<<<--<<<< <----<<-<< <<<<<-<--< <<--<<<<-- -<<<<<____ >>>>>->>>> 

                                                              *** 
UAGUCUCUUU UAUGAUUGGU UGAACUUUUU CAAAGUAAAU AUUCUUAACU GAAACAACUU   180
->>>-->--- >>>>>>>->> ->>>>>---- ->>>>>>>,, ,,,,,,,,)) )))))))))) 

********** ********
AUAUUGUAAA ACGGAGGG  198
)))))))-)) ))))))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs