IGR sequence:igr2835#chr5#x1=14105322#l=9222
Mature miRNA sequence:CUCCGUUUUACAAUAUAAGU
encoded miRNA:MIR51f
Precursor location:3185 - 3382 (negative strand)
precursor length:198 (56 basepairs)
MIR position:1 - 20 (3363 - 3382)
MIR length:20 (18 paired bases)
miRNA location TIGR v3:chr5:14049206<14049403 chr5:14108506<14108703
miRNA location TIGR v5:chr5:14458264<14458461 chr5:14517564<14517761
Folding energy:-36.12
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** **********                                             
CUCCGUUUUA CAAUAUAAGU UGUUUCAGUU AAGAAUAUUU ACUUUGAAAA AGUUCAACCA    60
(((-(((((( -((((((((( (((((,,,,, ,,<<<<-<<< _______>>> ->>>>,,,,, 

                                                                  
AUCAUAAAAG AGACUAAAUA AUAUAAGUAA UCAUAAAAUA UUAAAGUAAC AUAUAAUUUG   120
,,,,,,,,,, <<<<<<<,[[ [[[[______ _______]]] ]]],,,,,,, ,,,,,,[[[[ 

                                                                  
CAUAGAAACU AGAAAAUAAC UUUUCUUGUA AAACAAAAAA AUUGGUCUAA AACAACUUAU   180
[[-[[[[[-- [[_______] ]]]]]]]]]] ]],,,,,,,, ,>>>>>>>,) )))))))))) 

                   
AUUAUGAAAC AGAGGGAG  198
)))-)))))) -)))::::

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs