IGR sequence:igr2835#chr5#x1=14105322#l=9222
Mature miRNA sequence:CUCCGUUUUACAAUAUAAGU
encoded miRNA:MIR51f
Precursor location:3189 - 3382 (negative strand)
precursor length:194 (56 basepairs)
MIR position:1 - 20 (3363 - 3382)
MIR length:20 (18 paired bases)
miRNA location TIGR v3:chr5:14049210<14049403 chr5:14108510<14108703
miRNA location TIGR v5:chr5:14458268<14458461 chr5:14517568<14517761
Folding energy:-34.82
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** **********                                             
CUCCGUUUUA CAAUAUAAGU UGUUUCAGUU AAGAAUAUUU ACUUUGAAAA AGUUCAACCA    60
(((-(((((( -((((((((( (((((,,,,, ,,<<<<-<<< _______>>> ->>>>,,,,, 

                                                                  
AUCAUAAAAG AGACUAAAUA AUAUAAGUAA UCAUAAAAUA UUAAAGUAAC AUAUAAUUUG   120
,,,,,,,,,, <<<<<<<,[[ [[[[______ _______]]] ]]],,,,,,, ,,,,,,[[[[ 

                                                                  
CAUAGAAACU AGAAAAUAAC UUUUCUUGUA AAACAAAAAA AUUGGUCUAA AACAACUUAU   180
[[-[[[[[-- [[_______] ]]]]]]]]]] ]],,,,,,,, ,>>>>>>>,) )))))))))) 

               
AUUAUGAAAC AGAG  194
)))-)))))) -)))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs