IGR sequence:igr2826#chr5#x1=14046022#l=5701
Mature miRNA sequence:CUUAUAUUGUAAAACGGAGGGAG
encoded miRNA:MIR51o
Precursor location:3185 - 3386 (positive strand)
precursor length:202 (73 basepairs)
MIR position:180 - 202 (3364 - 3386)
MIR length:23 (22 paired bases)
miRNA location TIGR v3:chr5:14049206>14049407 chr5:14108506>14108707
miRNA location TIGR v5:chr5:14458264>14458465 chr5:14517564>14517765
Folding energy:-58.90
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
CUCCCUCUGU UUCAUAAUAU AAGUUGUUUU AGACCAAUUU UUUUGUUUUA CAAGAAAAGU    60
(((((((((( ((-((((((( (((((((((( ((,,,,,<<< <<<<<_____ >>>>>>>>,< 

                                                                  
UAUUUUCUAG UUUCUAUGCA AAUUAUAUGU UACUUUAAUA UUUUAUGAUU ACUUAUAUUA   120
<<<<<<--<< <<<----<<- <<<<<<<-<- -<<<--<<<< ---<<<<<__ __>>>>>->> 

                                                                * 
UUUAGUCUCU UUUAUGAUUG GUUGAACUUU UUCAAAGUAA AUAUUCUUAA CUGAAACAAC   180
>>->>>-->- -->>>>>>>- >>->>>>>-- --->>>>>>> ,,,,,,,,,, )))))))))) 

********** ********** **
UUAUAUUGUA AAACGGAGGG AG  202
)))))))))- )))))))))) ))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs