IGR sequence:igr2826#chr5#x1=14046022#l=5701
Mature miRNA sequence:CCUCCGUUUUACAAUAUAAG
encoded miRNA:MIR51l
Precursor location:3188 - 3383 (negative strand)
precursor length:196 (57 basepairs)
MIR position:1 - 20 (3364 - 3383)
MIR length:20 (18 paired bases)
miRNA location TIGR v3:chr5:14049209<14049404 chr5:14108509<14108704
miRNA location TIGR v5:chr5:14458267<14458462 chr5:14517567<14517762
Folding energy:-38.12
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** **********                                             
CCUCCGUUUU ACAAUAUAAG UUGUUUCAGU UAAGAAUAUU UACUUUGAAA AAGUUCAACC    60
((((-((((( (-(((((((( ((((((,,,, ,,,<<<<-<< <_______>> >->>>>,,,, 

                                                                  
AAUCAUAAAA GAGACUAAAU AAUAUAAGUA AUCAUAAAAU AUUAAAGUAA CAUAUAAUUU   120
,,,,,,,,,, ,<<<<<<<,[ [[[[[_____ ________]] ]]]],,,,,, ,,,,,,,[[[ 

                                                                  
GCAUAGAAAC UAGAAAAUAA CUUUUCUUGU AAAACAAAAA AAUUGGUCUA AAACAACUUA   180
[[[-[[[[[- -[[_______ ]]]]]]]]]] ]]],,,,,,, ,,>>>>>>>, )))))))))) 

                 
UAUUAUGAAA CAGAGG  196
))))-))))) )-))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs