IGR sequence:igr2826#chr5#x1=14046022#l=5701
Mature miRNA sequence:ACUUAUAUUGUAAAACGGAG
encoded miRNA:MIR51e
Precursor location:3189 - 3382 (positive strand)
precursor length:194 (69 basepairs)
MIR position:175 - 194 (3363 - 3382)
MIR length:20 (19 paired bases)
miRNA location TIGR v3:chr5:14049210>14049403 chr5:14108510>14108703
miRNA location TIGR v5:chr5:14458268>14458461 chr5:14517568>14517761
Folding energy:-47.80
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
CUCUGUUUCA UAAUAUAAGU UGUUUUAGAC CAAUUUUUUU GUUUUACAAG AAAAGUUAUU    60
((((((((-( (((((((((( ((((((((,, ,,,<<<<<<< <_____>>>> >>>>,<<<<< 

                                                                  
UUCUAGUUUC UAUGCAAAUU AUAUGUUACU UUAAUAUUUU AUGAUUACUU AUAUUAUUUA   120
<<--<<<<<- ---<<-<<<< <<<-<--<<< --<<<<---< <<<<____>> >>>->>>>-> 

                                                           ****** 
GUCUCUUUUA UGAUUGGUUG AACUUUUUCA AAGUAAAUAU UCUUAACUGA AACAACUUAU   180
>>-->--->> >>>>>->>-> >>>>-----> >>>>>>,,,, ,,,,,,)))) )))))))))) 

********** ****
AUUGUAAAAC GGAG  194
)))))-)))) ))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs