IGR sequence:igr2585#chr1#x1=11134319#l=5910
Mature miRNA sequence:GCUGAAGCUGCCAGCAUGAUCUGGU
encoded miRNA:MIR36b
Precursor location:3217 - 3562 (positive strand)
precursor length:346 (119 basepairs)
MIR position:1 - 25 (3217 - 3241)
MIR length:25 (23 paired bases)
miRNA location TIGR v3:chr1:11137535>11137880
miRNA location TIGR v5:chr1:11137535>11137880
Folding energy:-112.80
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** ********** *****                                       
GCUGAAGCUG CCAGCAUGAU CUGGUAAUCG CUACAUACGA CAUACACACA UCACUAAACU    60
(((((((((( (-((-((((( ((((((---( (((--((-(( (((((((((( -((((,,,,, 

                                                                  
UCUUUAUAAU UUAUGCACAC ACAUACAGCU CUUAAUGGCC ACAACUCAAA GUUAUAAUUA   120
,,,,<<____ _>>,,,<<<< <<<<<<,[[[ ______]]], ,,,,,,,,,[ [[[[[[[[[[ 

                                                                  
GUGCAUGAUC UCUAGUUAUU UGACUGCUUU UAAUAUAUGU UUAUGGAUUC ACGCAUGUGU   180
[-[______] -]]]]]]]]- -]]]],,,,, ,,[[[[[[[[ [[[[[,,,,, {{{{{-{{{{ 

                                                                  
GUGUAUGUAC AUAAUUUACA UGCAUGCACU UUGUGUAUGG UACACAUCAA UUUGAACCCG   240
{{{{{{{{{_ ______}}}} }}}}}}}}}- -}}}}},{{{ {{-{{{---- {{{{{{____ 

                                                                  
UUCAAAAUUC UGUUUUUAUU AGUAUAUAUA UAGAUGUAUG UGGUGUGUGU GUCAGUGUGU   300
}}}}}}---- }}}---}}}} },,,,,,,]] ]]]]]]]]]] ],>>>>>>>> >>,))))))) 

                                                  
GUGUGUGUUU AUAGAUAGUA GUACUAGGUC AUCCUGCAGC UUCAGU  346
)))))))))- -))--))))- -))))))))) ))-))))))) ))))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs