IGR sequence:igr2356#chr3#x1=9872012#l=10062
Mature miRNA sequence:ACAGGCAAGUCAUCCUUGGCUACCA
encoded miRNA:MIR47b
Precursor location:7445 - 7577 (positive strand)
precursor length:133 (49 basepairs)
MIR position:109 - 133 (7553 - 7577)
MIR length:25 (20 paired bases)
miRNA location TIGR v3:chr3:9879456>9879588
miRNA location TIGR v5:chr3:9879446>9879578
Folding energy:-54.01
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
GAUAGCCAAG GAGACUGCCU GAUGUCUUUU GAUGAGUAAA AUGGUCAUUG CUUGAUAUAA    60
(-(((((((( (((((((((( (---((((-- --(((((((( ((((((((-( -((((((--( 

                                                    ** ********** 
CUUAUAGUCA CUUGUCAAAC AUGACACUAA CCCAUUUUAC UCAAAGAAAC AGGCAAGUCA   120
(_____))-- --))))))-) ))))------ -))))))))) )))))))--) ))))-))))- 

********** ***
UCCUUGGCUA CCA  133
)))))))))) -):

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs