IGR sequence:igr2356#chr3#x1=9872012#l=10062
Mature miRNA sequence:ACAGGCAAGUCAUCCUUGGCUA
encoded miRNA:MIR47a
Precursor location:7447 - 7574 (positive strand)
precursor length:128 (48 basepairs)
MIR position:107 - 128 (7553 - 7574)
MIR length:22 (19 paired bases)
miRNA location TIGR v3:chr3:9879458>9879585
miRNA location TIGR v5:chr3:9879448>9879575
Folding energy:-52.91
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
UAGCCAAGGA GACUGCCUGA UGUCUUUUGA UGAGUAAAAU GGUCAUUGCU UGAUAUAACU    60
(((((((((( (((((((((- --((((---- (((((((((( ((((((-(-( (((((--((_ 

                                                  **** ********** 
UAUAGUCACU UGUCAAACAU GACACUAACC CAUUUUACUC AAAGAAACAG GCAAGUCAUC   120
____))---- ))))))-))) ))-------) )))))))))) )))))--))) ))-))))-)) 

********
CUUGGCUA  128
))))))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs