IGR sequence:igr2356#chr3#x1=9872012#l=10062
Mature miRNA sequence:UAGCCAAGGAUGACUUGCCUG
encoded miRNA:MIR43a
Precursor location:5150 - 5296 (negative strand)
precursor length:147 (54 basepairs)
MIR position:1 - 21 (5276 - 5296)
MIR length:21 (19 paired bases)
miRNA location TIGR v3:chr3:9877161<9877307
miRNA location TIGR v5:chr3:9877151<9877297
Folding energy:-61.44
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** ********** *                                           
UAGCCAAGGA UGACUUGCCU GAUCUUUUUC ACCUCCAUGA UUCAAUUUUA AGUUCGUGGA    60
(((((((((( -((((-(((( ((-(((---- ((((-((-(( ((((((---- --------(( 

                                                                  
UUUUGGAUUA UUAUGCGUUU AAAAGGUAUA AUAAUUUGAG AUCAUGUUGA AUCUUGCGGG   120
(((--((((( ((((((-(__ ___)-))))) ))))))--)) )))--))))) )))-))-))) 

                             
UUAGGUUUCA GGCAGUCUCU UUGGCUA  147
)-)))--))) )))))))))) )))))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs