IGR sequence:igr2356#chr3#x1=9872012#l=10062
Mature miRNA sequence:CAGGCAAGUCAUCCUUGGCUA
encoded miRNA:MIR44d
Precursor location:5150 - 5296 (positive strand)
precursor length:147 (41 basepairs)
MIR position:127 - 147 (5276 - 5296)
MIR length:21 (18 paired bases)
miRNA location TIGR v3:chr3:9877161>9877307
miRNA location TIGR v5:chr3:9877151>9877297
Folding energy:-37.46
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
UAGCCAAAGA GACUGCCUGA AACCUAACCC GCAAGAUUCA ACAUGAUCUC AAAUUAUUAU    60
(((((((-(( (((((((((( ------(((- -((-(((((( (,,<<____> >,<<<<<<<< 

                                                                  
ACCUUUUAAA CGCAUAAUAA UCCAAAAUCC ACGAACUUAA AAUUGAAUCA UGGAGGUGAA   120
__________ ___>>>>>>> >,,,,,,,,, ,,,,,,,,,, ,,)))))))- ))--)))--- 

      **** ********** *******
AAAGAUCAGG CAAGUCAUCC UUGGCUA  147
-----))))) )-))))-))- )))))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs