IGR sequence:igr2356#chr3#x1=9872012#l=10062
Mature miRNA sequence:UAGCCAAGGAUGACUUGCCUG
encoded miRNA:MIR43a
Precursor location:4806 - 4931 (negative strand)
precursor length:126 (47 basepairs)
MIR position:1 - 21 (4911 - 4931)
MIR length:21 (19 paired bases)
miRNA location TIGR v3:chr3:9876817<9876942
miRNA location TIGR v5:chr3:9876807<9876932
Folding energy:-52.70
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** ********** *                                           
UAGCCAAGGA UGACUUGCCU GCUUCUCUGA ACAAAAUGGU CGAUGUCAUG UUUUGAAGUG    60
(((((((((( -((((-(((( (--(((-((( (((((((((( ((-------- (((((--((( 

                                                                  
ACUAUAAGUU AUACCAAGAA AUGACCAUUU UGUUUAUAAA UAGACAUCAG GCAGUCUCCU   120
((_____))) ))--)))))- -))))))))) ))))))---- -)))---))) )))))))))) 

      
UGGCUA  126
))))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs