IGR sequence:igr2356#chr3#x1=9872012#l=10062
Mature miRNA sequence:UAGCCAAGGAUGACUUGCCUG
encoded miRNA:MIR43a
Precursor location:1594 - 1739 (negative strand)
precursor length:146 (53 basepairs)
MIR position:1 - 21 (1719 - 1739)
MIR length:21 (19 paired bases)
miRNA location TIGR v3:chr3:9873605<9873750
miRNA location TIGR v5:chr3:9873595<9873740
Folding energy:-63.64
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** ********** *                                           
UAGCCAAGGA UGACUUGCCU GAUCUUUUUC ACCUCCAUGA UUCAAUUUGU AAUUCAUGGG    60
(((((((((( -((((-(((( ((-(((---- ((((-((-(( ((((((---- --------(( 

                                                                  
UUUUGGAUUA UUAUACAUUC AAAAGUAUAA UAAUUUGAAA UCAUGUUGAA UCUUGCGGGU   120
(((--((((( ((((((____ ____)))))) )))))--))) ))--)))))) ))-))-)))) 

                            
UAGGUUUCAG GCAGUCUCCU UGGCUA  146
-)))--)))) )))))))))) ))))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs