IGR sequence:igr2356#chr3#x1=9872012#l=10062
Mature miRNA sequence:UAGCCAAGGAUGACUUGCCUG
encoded miRNA:MIR43a
Precursor location:1237 - 1362 (negative strand)
precursor length:126 (46 basepairs)
MIR position:1 - 21 (1342 - 1362)
MIR length:21 (19 paired bases)
miRNA location TIGR v3:chr3:9873248<9873373
miRNA location TIGR v5:chr3:9873238<9873363
Folding energy:-50.30
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** ********** *                                           
UAGCCAAGGA UGACUUGCCU GACUCUUUGU GUAAAAUGUU UAGUGUCUUG UUUGAAGUCA    60
(((((((((( -((((-(((( ((-(((((-- ((((((((,, <<<<<-<<<_ ____>>>->> 

                                                                  
CUAUAAGUUG UAUCAAGCAA UGACCAUUUU GCUUAUAAAA AAGAUAUCAG GCAGUCUCCU   120
>>>,,,<<<< <_____>>>> >,,,)))))) ))-------) ))))--)))) )))))))))) 

      
UGGCUA  126
))))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs