IGR sequence:igr2179#chr5#x1=9830792#l=1288
Mature miRNA sequence:AUGGAUGUCAUUAUCCAUCAUU
encoded miRNA:MIR71
Precursor location:776 - 942 (negative strand)
precursor length:167 (57 basepairs)
MIR position:1 - 22 (921 - 942)
MIR length:22 (17 paired bases)
miRNA location TIGR v3:chr5:9831567<9831733
miRNA location TIGR v5:chr5:9872647<9872813
Folding energy:-46.59
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** ********** **                                          
AUGGAUGUCA UUAUCCAUCA UUCAUCUCUA UCCAUAAGAU AUGGAUGAUG UUUAUCCAUU    60
(((((((-(( ((((((((-- ---((((--- -----(((-- ((((((((-- -((((((((- 

                                                                  
AUUUCUUCCU UAAGAUAUAG AUGAUGUUUA UCCAUUAUUU CCUUCUUAAA AUAUGGAUGA   120
((((------ (((((---(( ((((((____ __)))))))) ---))))))) )))))))))) 

                                                   
UGUUUAUCCA UUACUUCAUC UUUAAGAUAU GGAUGAUGUU UAUCCAU  167
---))))))) )--)))---- ----)))))) ))))))))-- )))))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs