IGR sequence:igr216#chr2#x1=1039061#l=1163
Mature miRNA sequence:CAAAGGGGUGACCUGAGAACACA
encoded miRNA:MIR1a
Precursor location:883 - 971 (negative strand)
precursor length:89 (33 basepairs)
MIR position:1 - 23 (949 - 971)
MIR length:23 (20 paired bases)
miRNA location TIGR v3:chr2:1039943<1040031
miRNA location TIGR v5:chr2:1040943<1041031
Folding energy:-33.70
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** ********** ***                                         
CAAAGGGGUG ACCUGAGAAC ACAAAACUCA AUGGUUUCAA UGGAAAUUUG AAGAAACCAU    60
(((((((((( -(-((-(((( (((----((- (((((((((( (____)))-- --)))))))) 

                               
AGGAUAUGUG UUCACAUGCC ACUCCUUUG   89
-))---)))) )))-))-)-) )))))))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs