IGR sequence:igr2076#chr4#x1=10733600#l=1162
Mature miRNA sequence:UAUUCCCUUCGUUUCACAAUAUAAG
encoded miRNA:MIR55p
Precursor location:404 - 624 (negative strand)
precursor length:221 (66 basepairs)
MIR position:1 - 25 (600 - 624)
MIR length:25 (24 paired bases)
miRNA location TIGR v3:chr4:10734003<10734223
miRNA location TIGR v5:chr4:11769009<11769229
Folding energy:-56.59
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** ********** *****                                       
UAUUCCCUUC GUUUCACAAU AUAAGUUGUU UUAACUAAAA AUACGUAUAU UAAGAAUAUU    60
(((((((((( ((((((-((( (((((((((( (((((((((< <<<<,,,,,, ,,,[[[[[[[ 

                                                                  
UAUUUUUAAA AUGUUCAACC AAUUAUAAAA AAAACUGUAG AAUAUAAAUA AUCAUAAAGU   120
[_______]] ]]]]]],,,, ,,[[[[[___ _____]]]]] ,,,,,,,,,, ,,,,,,,,>> 

                                                                  
AUUAAAAUAA UAUAUAAUUU GCAUAGAAAC UUGAAAACAA CUUAUAUUAU AAAACAAAAA   180
>>>,,,[[[[ [[[[------ -[[_______ _]]------- --]]]]]]]] ,,,,,,,,,, 

                                             
AUUUGGUAUA AAACAACUUA UAUUAUGAAA CGGAGGGAGU A  221
,))))))-)) )))))))))) ))))-))))) )))))))))) )

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs