IGR sequence:igr2076#chr4#x1=10733600#l=1162
Mature miRNA sequence:ACUUAUAUUGUGAAACGAAGGGA
encoded miRNA:MIR55i
Precursor location:407 - 621 (positive strand)
precursor length:215 (67 basepairs)
MIR position:193 - 215 (599 - 621)
MIR length:23 (22 paired bases)
miRNA location TIGR v3:chr4:10734006>10734220
miRNA location TIGR v5:chr4:11769012>11769226
Folding energy:-52.64
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
UCCCUCCGUU UCAUAAUAUA AGUUGUUUUA UACCAAAUUU UUUGUUUUAU AAUAUAAGUU    60
(((((-(((( (((((((((( (((((((((( ,<<<<<,,,, ,,[[[[--[[ [[[[[[--[[ 

                                                                  
GUUUUCAAGU UUCUAUGCAA AUUAUAUAUU AUUUUAAUAC UUUAUGAUUA UUUAUAUUCU   120
[[________ ______]]]] ----]]]]]] ]]---]]]], ,,[[[[[___ _]]]]],,,, 

                                                                  
ACAGUUUUUU UUAUAAUUGG UUGAACAUUU UAAAAAUAAA UAUUCUUAAU AUACGUAUUU   180
,,,,,,,,,, ,,,,,,>>>> >,,,,,,,,[ [[[[[[[[-- [[[_______ ]]]--]]]]] 

             ******** ********** *****
UUAGUUAAAA CAACUUAUAU UGUGAAACGA AGGGA  215
]]]],))))) )))))))))) )))))))))- )))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs