IGR sequence:igr2076#chr4#x1=10733600#l=1162
Mature miRNA sequence:ACUUAUAUUGUGAAACGAAGG
encoded miRNA:MIR55g
Precursor location:409 - 619 (positive strand)
precursor length:211 (65 basepairs)
MIR position:191 - 211 (599 - 619)
MIR length:21 (20 paired bases)
miRNA location TIGR v3:chr4:10734008>10734218
miRNA location TIGR v5:chr4:11769014>11769224
Folding energy:-47.44
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
CCUCCGUUUC AUAAUAUAAG UUGUUUUAUA CCAAAUUUUU UGUUUUAUAA UAUAAGUUGU    60
(((-(((((( (((((((((( ((((((((,< <<<<,,,,,, [[[[--[[[[ [[[[--[[[[ 

                                                                  
UUUCAAGUUU CUAUGCAAAU UAUAUAUUAU UUUAAUACUU UAUGAUUAUU UAUAUUCUAC   120
__________ ____]]]]-- --]]]]]]]] ---]]]],,, [[[[[____] ]]]],,,,,, 

                                                                  
AGUUUUUUUU AUAAUUGGUU GAACAUUUUA AAAAUAAAUA UUCUUAAUAU ACGUAUUUUU   180
,,,,,,,,,, ,,,,>>>>>, ,,,,,,,[[[ [[[[[[--[[ [_______]] ]--]]]]]]] 

           ********** ********** *
AGUUAAAACA ACUUAUAUUG UGAAACGAAG G  211
]],))))))) )))))))))) )))))))-)) )

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs