IGR sequence:igr2076#chr4#x1=10733600#l=1162
Mature miRNA sequence:ACUUAUAUUGUGAAACGAAG
encoded miRNA:MIR55f
Precursor location:410 - 618 (positive strand)
precursor length:209 (62 basepairs)
MIR position:190 - 209 (599 - 618)
MIR length:20 (17 paired bases)
miRNA location TIGR v3:chr4:10734009>10734217
miRNA location TIGR v5:chr4:11769015>11769223
Folding energy:-44.54
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
CUCCGUUUCA UAAUAUAAGU UGUUUUAUAC CAAAUUUUUU GUUUUAUAAU AUAAGUUGUU    60
:::((((((( (((((((((( (((((((,<< <<<,,,,,,[ [[[--[[[[[ [[[--[[[[_ 

                                                                  
UUCAAGUUUC UAUGCAAAUU AUAUAUUAUU UUAAUACUUU AUGAUUAUUU AUAUUCUACA   120
__________ ___]]]]--- -]]]]]]]]- --]]]],,,[ [[[[____]] ]]],,,,,,, 

                                                                  
GUUUUUUUUA UAAUUGGUUG AACAUUUUAA AAAUAAAUAU UCUUAAUAUA CGUAUUUUUA   180
,,,,,,,,,, ,,,>>>>>,, ,,,,,,[[[[ [[[[[--[[[ _______]]] --]]]]]]]] 

         * ********** *********
GUUAAAACAA CUUAUAUUGU GAAACGAAG  209
],)))))))) )))))))))) )))))):::

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs