IGR sequence:igr2044#chr5#x1=9109684#l=5223
Mature miRNA sequence:GUGUGCUCACUCUCUUCUGUCA
encoded miRNA:MIR17c
Precursor location:4190 - 4279 (negative strand)
precursor length:90 (33 basepairs)
MIR position:69 - 90 (4190 - 4211)
MIR length:22 (21 paired bases)
miRNA location TIGR v3:chr5:9113873<9113962
miRNA location TIGR v5:chr5:9136129<9136218
Folding energy:-46.00
BLAST hit against RFAM Atha miRNAs:ath-MIR156f
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
UGACGGAUAG AGAGUGAGCA CACAUAGCUU CAAGCAUGGA ACCUUCAAAU AUGCAAGAAA    60
:((((((-(( (((((((((( (((((-(((( (--(((((__ _________) ))))--)-)) 

        ** ********** ********** 
GCCACCAUGU GUGCUCACUC UCUUCUGUCA    90
))----)))) )))))))))) ))))))))):

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs