IGR sequence:igr1987#chr3#x1=8101048#l=11724
Mature miRNA sequence:AUGAAGCUGCCAGCAUGAUCU
encoded miRNA:MIR54b
Precursor location:7049 - 7150 (positive strand)
precursor length:102 (40 basepairs)
MIR position:1 - 21 (7049 - 7069)
MIR length:21 (19 paired bases)
miRNA location TIGR v3:chr3:8108096>8108197
miRNA location TIGR v5:chr3:8108096>8108197
Folding energy:-43.70
BLAST hit against RFAM Atha miRNAs:ath-MIR167a
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** ********** *                                           
AUGAAGCUGC CAGCAUGAUC UAAUUAGCUU UCUUUAUCCU UUGUUGUGUU UCAUGACGAU    60
:((((((((( -((((((((( (((((((((- (((((--((- ((((--((__ _))--))))- 

                                              
GGUUAAGAGA UCAGUCUCGA UUAGAUCAUG UUCGCAGUUU CA  102
))---))))) --))-))-)) )))))))))) ))-))))))) ))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs