IGR sequence:igr1987#chr3#x1=8101048#l=11724
Mature miRNA sequence:GAUGAAGCUGCCAGCAUGAUCU
encoded miRNA:MIR54a
Precursor location:7048 - 7152 (positive strand)
precursor length:105 (40 basepairs)
MIR position:1 - 22 (7048 - 7069)
MIR length:22 (19 paired bases)
miRNA location TIGR v3:chr3:8108095>8108199
miRNA location TIGR v5:chr3:8108095>8108199
Folding energy:-44.20
BLAST hit against RFAM Atha miRNAs:ath-MIR167a
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** ********** **                                          
GAUGAAGCUG CCAGCAUGAU CUAAUUAGCU UUCUUUAUCC UUUGUUGUGU UUCAUGACGA    60
::(((((((( (-(((((((( (((((((((( -(((((--(( -((((--((_ __))--)))) 

                                                 
UGGUUAAGAG AUCAGUCUCG AUUAGAUCAU GUUCGCAGUU UCACC  105
-))---)))) )--))-))-) )))))))))) )))-)))))) )))::

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs