IGR sequence:igr17#chr1#x1=77747#l=4997
Mature miRNA sequence:CCAGACAACAUUCCCCUCAACUG
encoded miRNA:MIR50
Precursor location:1181 - 1293 (positive strand)
precursor length:113 (36 basepairs)
MIR position:91 - 113 (1271 - 1293)
MIR length:23 (18 paired bases)
miRNA location TIGR v3:chr1:78927>79039
miRNA location TIGR v5:chr1:78927>79039
Folding energy:-45.60
BLAST hit against RFAM Atha miRNAs:ath-MIR165a
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
GUUGGGGGGG AUGAAGCCUG GUCCGAGGAU ACUCUCUAUG AUCACUUGAA UCAUUAACAU    60
(((((((((( (((--(-((( (--((((((( (,,,,,,<<< <<<____>-> >>>>,,,,<< 

                                 ********** ********** ***
ACACAUGUAU AUAUCUAUAA UAUCCUCGAU CCAGACAACA UUCCCCUCAA CUG  113
<<____>>>> ,,,,,,,,,, ))))))))-- ))))-)--)) )))))))))) )::

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs