IGR sequence: | igr922#chr3#x1=3597929#l=5132 |
---|---|
Mature miRNA sequence: | UGCAGCAUCAUCAAGAUUCUCAU |
encoded miRNA: | MIR21a |
Precursor location: | 1870 - 1970 (positive strand) |
precursor length: | 101 (34 basepairs) |
MIR position: | 1 - 23 (1870 - 1892) |
MIR length: | 23 (19 paired bases) |
miRNA location TIGR v3: | chr3:3599798>3599898 |
miRNA location TIGR v5: | chr3:3599798>3599898 |
Folding energy: | -32.73 |
BLAST hit against RFAM Atha miRNAs: | none |
Belongs to miRNAs-targets cluster: | none |
Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.
********** ********** *** UGCAGCAUCA UCAAGAUUCU CAUACAUACA UCAAAAAUCU AAUCAUAAAU GGGUUUAUUU 60 :(-((((((( (((((((((- ((---((-(( (((((((((( (________) ))))))---- ACACGAAUAC UUGAUGAUUU GUGAAUCUUG AUGAUGCUCC A 101 ---------- ))))))))-) )-)))))))) ))))))))-) :
Postscript file CT file PNG file fasta file Stockholm file
Targets:
No Targets found for this miRNA
Rice homologs
- gnl|BL_ORD_ID|311_87588-87677_68-90
- gnl|BL_ORD_ID|311_87588+87677_1-23