IGR sequence:igr886#chr5#x1=3863724#l=4928
Mature miRNA sequence:GUGUGCUCACUCUCUUCUGUCA
encoded miRNA:MIR17c
Precursor location:3491 - 3586 (negative strand)
precursor length:96 (31 basepairs)
MIR position:75 - 96 (3491 - 3512)
MIR length:22 (20 paired bases)
miRNA location TIGR v3:chr5:3867214<3867309
miRNA location TIGR v5:chr5:3867214<3867309
Folding energy:-38.67
BLAST hit against RFAM Atha miRNAs:ath-MIR156e
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
UGACAGAGAG AGAGUAAGCA CACAUAGCUU CAAGCAUGAA ACCCUAAUCA AAAAAGCAUG    60
:((((((-(( (((((-(((( (((((-(-(( (--(((((__ __________ ______)))) 

               ****** ********** ******
CAAGAAACCA CCAUGUGUGC UCACUCUCUU CUGUCA   96
)--)))---- )-)))))))) )-)))))))) ))))):

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs