IGR sequence:igr7#chr1#x1=40945#l=4403
Mature miRNA sequence:CCGAGAUUUAAAACCCUAGU
encoded miRNA:MIR38
Precursor location:3988 - 4141 (positive strand)
precursor length:154 (49 basepairs)
MIR position:135 - 154 (4122 - 4141)
MIR length:20 (17 paired bases)
miRNA location TIGR v3:chr1:44932>45085
miRNA location TIGR v5:chr1:44932>45085
Folding energy:-47.70
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
ACUAGGGUUU GUGUGAUUUC UGGUGUAAGA AGGUAAAAGG AGGUAGUUAU CAGAUGGGCC    60
(((((((((( ----(((((( -((----((( --(-(((((( --((((,,,, ,,,,<<<<<< 

                                                                  
CACUUGAAAU CAUUUCACUG GGCCUAAACA AAUAUAAAGC CCAUUUAUCA UUUAUGGCCU   120
<<--<<<<__ ___>>>>->> >>>>>>,,,, ,,,<<<<<__ ___>>>>>,, ,))))--))) 

               ****** ********** ****
UUUUCAGUCU CCUCCCGAGA UUUAAAACCC UAGU  154
)))-)--))) ---))-)))) ))--)))))) ))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs