IGR sequence:igr1051#chr3#x1=4116016#l=6048
Mature miRNA sequence:CUUAUAUUAUGAAACGAAGG
encoded miRNA:MIR90b
Precursor location:2496 - 2670 (negative strand)
precursor length:175 (59 basepairs)
MIR position:156 - 175 (2496 - 2515)
MIR length:20 (18 paired bases)
miRNA location TIGR v3:chr3:4118511<4118685
miRNA location TIGR v5:chr3:4118511<4118685
Folding energy:-35.92
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
UUUUUGUUUU ACAAUAUAAG UUGUUUUCAA GUUUUUAUGC AAAUUAUAUA AUAUUUUAAU    60
:((((((((( (-(((((((( (((((((--( (-------(( (,<<<<<<<< <<<<-<<<<< 

                                                                  
AAUUUAUGAU UAAUUAUAUU AUGUAGUCUC UUUUCUAAUU GGUUAAACUU UUUAAAAAUA   120
________>> >>>-->>>>> >>>>>>>,,, ,,,,,,,,,, <<<<<<<<-- <<<<____>> 

                                      ***** ********** *****
AAUGUUCUUA AUCUACGUGC UUUUAUCUAA AACAACUUAU AUUAUGAAAC GAAGG  175
>>->>-->>> >>>,,,,))) ------)))) )))))))))) )))-)))))) )))):

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs