IGR sequence:igr648#chr5#x1=2838168#l=3068
Mature miRNA sequence:UCUCGGACCAGGCUUCAUUCC
encoded miRNA:MIR22a
Precursor location:486 - 589 (positive strand)
precursor length:104 (33 basepairs)
MIR position:84 - 104 (569 - 589)
MIR length:21 (16 paired bases)
miRNA location TIGR v3:chr5:2838653>2838756
miRNA location TIGR v5:chr5:2838653>2838756
Folding energy:-35.00
BLAST hit against RFAM Atha miRNAs:ath-MIR166c
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
GGAUUGUUGU CUGGCUCGAG GUCAUGAAGA AGAGAAUCAC UCGAAUUAAU UUGGAAGAAC    60
(((-((--(( ((((--(((( (((((--((, ,<<<_____> >>,,,<<<<< <<<______> 

                         ******* ********** ****
AAAUUAAGAA AACCCUAGAU GAUUCUCGGA CCAGGCUUCA UUCC  104
>>>>>>>,,, ,,,,))--)) ))-)))))-- ))))))--)) -)))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs