IGR sequence:igr648#chr5#x1=2838168#l=3068
Mature miRNA sequence:UCUCGGACCAGGCUUCAUUCC
encoded miRNA:MIR22a
Precursor location:2464 - 2560 (positive strand)
precursor length:97 (33 basepairs)
MIR position:77 - 97 (2540 - 2560)
MIR length:21 (16 paired bases)
miRNA location TIGR v3:chr5:2840631>2840727
miRNA location TIGR v5:chr5:2840631>2840727
Folding energy:-33.70
BLAST hit against RFAM Atha miRNAs:ath-MIR166d
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

                                                                  
GGAAUAUUGU CUGGCUCGAG GUCAUGAAGA AGAUCGGUAG AUUGAUUCAU UUUAAAGAGU    60
(((((---(( ((((--(((( (((((--((, ,<<<<____> >>>,,<<<<< <<____>>>> 

                 **** ********** *******
GAAAUCCCUA AAUGAUUCUC GGACCAGGCU UCAUUCC   97
>>>,,,,))- -))))-)))) )--))))))- --)))))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs