IGR sequence:igr5691#chr1#x1=26486707#l=1307
Mature miRNA sequence:CGGAGGAACUCGUCGCCGUC
encoded miRNA:MIR8
Precursor location:157 - 361 (negative strand)
precursor length:205 (56 basepairs)
MIR position:1 - 20 (342 - 361)
MIR length:20 (16 paired bases)
miRNA location TIGR v3:chr1:26486863<26487067
miRNA location TIGR v5:chr1:26890735<26890939
Folding energy:-59.09
BLAST hit against RFAM Atha miRNAs:none
Belongs to miRNAs-targets cluster:none

Sequence and secondary structure:
Presumed mature miRNA positions are indicated by *'s.

********** **********                                             
CGGAGGAACU CGUCGCCGUC GUUUCUUCAG CCCAUUGUAU UCGAGAAAUU UCAAGAGAAC    60
:((-((((-( (((((((((, ,,,,,,,,<< <<-<<<<<<< <,[[[[[--[ [[____]]]- 

                                                                  
GAUUCUCUUC GCUGUGAUUU UCUUAGCUAU CUUCCCUCCU CUCUACUUCC AUUUCAAGCU   120
--]]]]],,, [[-[[[[[-- [[,,{{{{__ __________ __________ ______}}}} 

                                                                  
CCGACGAAUU CGUCAGAUUG UCGCGCAAAA GUGCGAUUGG CUUCACCAUC CUCCACUUGU   180
,,{{{{____ }}}},]]--] ]]]]]],,,> >>>>>>>->> >>,,,,,,,, ,,,{{{____ 

                           
CUGUGCUCAC GGCGGCGAUU CCACC  205
__}}},,,)) )))))))))) ))-))

Postscript file CT file PNG file fasta file Stockholm file

Targets:
No Targets found for this miRNA

Rice homologs